| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_02220 |
|---|
| Symbol | ybl108 |
|---|
| ID | 8112770 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012892 |
|---|
| Strand | - |
|---|
| Start bp | 2337696 |
|---|
| End bp | 2338181 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644848426 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002999999 |
|---|
| Protein GI | 251785695 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGGGG GGCTGCTGAT CTGCACTACG GTAGGGGAAT TGACTTACGC AGGCAGTAAG
CCAGTAAATA TGGTTTTACG TGTACAGGTA GATGGGCCTC CACCATGTAC CGTTACGGGG
AGCGATGTCG ATTTTGGGGA TGTGCTCATC AGGCGTATAG ATGGCAGCCA GTATTTGCAG
CCAGTAACTT ACAAGCTGGA CTGCGGGCAA CGACTTACTG GTGCGGATGA CTTACGTATG
CAGTTGCAGG GTCCTACAAG CGTCATCAAT GGTGAAACTG TGCTTAATAC AGGTATTGAT
GGGTTTGGTA TTCGTATTCA AAACGCTACG AATGACTCGC TTATTACGGT AGGAAGCAGT
GCTTGGCTAC CATTTAGCAT CGATAACCAA CCAACGCTTG AAGCTGTACC CGTGAAGCAG
AATGGGGTAT CGCTGGTATC TTCTGCATTC AGTGCTACTG CAACTATGGT GGTTGATTAT
CAATGA
|
|---|
| Protein sequence | MVGGLLICTT VGELTYAGSK PVNMVLRVQV DGPPPCTVTG SDVDFGDVLI RRIDGSQYLQ
PVTYKLDCGQ RLTGADDLRM QLQGPTSVIN GETVLNTGID GFGIRIQNAT NDSLITVGSS
AWLPFSIDNQ PTLEAVPVKQ NGVSLVSSAF SATATMVVDY Q
|
|---|
| |