Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | B21_02107 |
Symbol | atoD |
ID | 8113578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21 |
Kingdom | Bacteria |
Replicon accession | NC_012892 |
Strand | + |
Start bp | 2213118 |
End bp | 2213780 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644848315 |
Product | hypothetical protein |
Protein accession | YP_002999888 |
Protein GI | 251785584 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.408134 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAA AATTGATGAC ATTACAAGAC GCCACCGGCT TCTTTCGTGA CGGCATGACC ATCATGGTGG GCGGATTTAT GGGGATTGGC ACTCCATCCC GCCTGGTTGA AGCATTACTG GAATCTGGTG TTCGCGACCT GACATTGATA GCCAATGATA CCGCGTTTGT TGATACCGGC ATCGGTCCGC TCATCGTCAA TGGTCGAGTC CGCAAAGTGA TTGCTTCACA TATCGGCACC AACCCGGAAA CAGGTCGGCG CATGATATCT GGTGAGATGG ACGTCGTTCT GGTGCCGCAA GGTACGCTAA TCGAGCAAAT TCGCTGTGGT GGAGCTGGAC TTGGTGGTTT TCTCACCCCA ACGGGTGTCG GCACCGTCGT AGAGGAAGGC AAACAGACAC TGACACTCGA CGGTAAAACC TGGCTGCTCG AACGCCCACT GCGCGCCGAC CTGGCGCTAA TTCGCGCTCA TCGTTGCGAC ACACTTGGCA ACCTGACCTA TCAACTTAGC GCCCGCAACT TTAACCCCCT GATAGCCCTT GCGGCTGATA TCACGCTGGT AGAGCCAGAT GAACTGGTCG AAACCGGCGA GCTGCAACCT GACCATATTG TCACCCCTGG TGCCGTTATC GACCACATCA TCGTTTCACA GGAGAGCAAA TAA
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Protein sequence | MKTKLMTLQD ATGFFRDGMT IMVGGFMGIG TPSRLVEALL ESGVRDLTLI ANDTAFVDTG IGPLIVNGRV RKVIASHIGT NPETGRRMIS GEMDVVLVPQ GTLIEQIRCG GAGLGGFLTP TGVGTVVEEG KQTLTLDGKT WLLERPLRAD LALIRAHRCD TLGNLTYQLS ARNFNPLIAL AADITLVEPD ELVETGELQP DHIVTPGAVI DHIIVSQESK
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