| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_01703 |
|---|
| Symbol | astD |
|---|
| ID | 8113572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012892 |
|---|
| Strand | - |
|---|
| Start bp | 1771984 |
|---|
| End bp | 1773462 |
|---|
| Gene Length | 1479 bp |
|---|
| Protein Length | 492 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644847925 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002999498 |
|---|
| Protein GI | 251785194 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR03240] succinylglutamic semialdehyde dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTTTAT GGATTAACGG TGACTGGATA ACGGGCCAGG GCGCATTGCG TGTGAGGCGT
AATCCGGTAT CGGGCGAGGT GTTATGGCAG GGCAATGATG CCGATGCCGC TCAGGTCGAG
CAGGCTTGTC GGGCAGCCCG TGCGGCGTTT CCGCGCTGGG CGCGGCTCTC ATTGGCTGAA
CGTCAGGTCG TTGTCGAACG CTTTGCCGGA TTGCTGGAAA GCAATAAAGC CGAATTAACC
GCGATTATTG CCAGAGAAAC GGGTAAGCCG CGCTGGGAAG CGGCAACCGA AGTGACGGCG
ATGATCAATA AAATCGCGAT ATCAATTAAG GCGTATCACG TTCGTACCGG CGAGCAGCGT
AGTGAAATGC CGGACGGTGC GGCGAGCCTG CGACATCGCC CGCACGGCGT GCTGGCGGTG
TTTGGGCCGT ATAATTTCCC TGGTCATTTG CCGAACGGAC ATATCGTTCC GGCATTGCTG
GCAGGTAACA CCATTATCTT TAAACCCAGC GAACTGACAC CGTGGAGTGG CGAAGCGGTA
ATGCGTTTAT GGCAGCAGGC TGGCTTGCCG CCGGGCGTAC TGAATCTGGT GCAGGGCGGG
CGTGAAACGG GTCAGGCGCT GAGTGCGCTG GAGGATCTCG ACGGTTTGCT GTTTACCGGT
AGCGCCAATA CCGGCTACCA GCTGCATCGC CAGCTCTCCG GTCAGCCGGA GAAAATTCTC
GCCCTTGAGA TGGGCGGTAA TAATCCGCTA ATTATCGATG AGGTGGCGGA TATCGACGCG
GCTGTCCATC TGACCATTCA GTCGGCGTTT GTCACAGCCG GGCAACGCTG CACCTGCGCC
CGCCGTTTAT TGCTCAAAAG CGGAGCGCAG GGCGATGCGT TTCTTGCTCG TCTGGTTGCC
GTCAGCCAGC GATTAACGCC GGGCAACTGG GATGACGAAC CGCAGCCGTT TATTGGCGGG
CTGATTTCTG AACAGGCCGC ACAGCAGGTG GTTACTGCCT GGCAGCAACT GGAAGCGATG
GGCGGACGAA CCCTGCTTGC GCCGCGCTTA TTACAATCAG AGACATCGTT GCTGACGCCG
GGGATCATTG AAATGACAGG CGTTGCTGGC GTACCAGATG AAGAGGTGTT CGGGCCGCTT
TTGCGCGTCT GGCGTTATGA TTCTTTCGAG GAAGCGATTC TAATGGCGAA TAACACTCGC
TTCGGACTCT CTTGCGGTCT GGTTTCCCCC GAGCGGGAAA AATTCGATCA ACTGTTGCTG
GAGGCGCGGG CGGGGATTGT TAACTGGAAC AAACCGCTTA CTGGTGCTGC CAGTACCGCG
CCATTCGGCG GCATTGGTGC ATCCGGTAAC CATCGCCCCA GCGCCTGGTA TGCCGCAGAT
TACTGCGCAT GGCCTATGGC GAGCCTGGAG TCGGACTCGT TAACTTTGCC CGCAACGCTT
AACCCCGGGC TGGATTTTTC CGATGAGGTG GTGCGATGA
|
|---|
| Protein sequence | MTLWINGDWI TGQGALRVRR NPVSGEVLWQ GNDADAAQVE QACRAARAAF PRWARLSLAE
RQVVVERFAG LLESNKAELT AIIARETGKP RWEAATEVTA MINKIAISIK AYHVRTGEQR
SEMPDGAASL RHRPHGVLAV FGPYNFPGHL PNGHIVPALL AGNTIIFKPS ELTPWSGEAV
MRLWQQAGLP PGVLNLVQGG RETGQALSAL EDLDGLLFTG SANTGYQLHR QLSGQPEKIL
ALEMGGNNPL IIDEVADIDA AVHLTIQSAF VTAGQRCTCA RRLLLKSGAQ GDAFLARLVA
VSQRLTPGNW DDEPQPFIGG LISEQAAQQV VTAWQQLEAM GGRTLLAPRL LQSETSLLTP
GIIEMTGVAG VPDEEVFGPL LRVWRYDSFE EAILMANNTR FGLSCGLVSP EREKFDQLLL
EARAGIVNWN KPLTGAASTA PFGGIGASGN HRPSAWYAAD YCAWPMASLE SDSLTLPATL
NPGLDFSDEV VR
|
|---|
| |