| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_01659 |
|---|
| Symbol | ydiD |
|---|
| ID | 8113829 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012892 |
|---|
| Strand | + |
|---|
| Start bp | 1726708 |
|---|
| End bp | 1728408 |
|---|
| Gene Length | 1701 bp |
|---|
| Protein Length | 566 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 644847883 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002999456 |
|---|
| Protein GI | 251785152 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATCCCA CAGGCCCGCA TCTCGGGCCT GATGTTCTGT TTCGAGAGTC CAAAATGAAA
GTGACATTAA CGTTCAACGA ACAACGTCGT GCGGCGTATC GTCAGCAAGG GTTATGGGGC
GATGCTTCAC TGGCCGATTA CTGGCAGCAG ACCGCTCGTG CGATGCCAGA CAAAATTGCC
GTGGTCGACA ATCATGGTGC AACGTACACC TATAGCGCGC TCGATCACGC CGCGAGCTGT
CTGGCAAACT GGATGTTAGC GAAGGGTATT GAATCAGGCG ATCGCATCGC ATTTCAACTG
CCTGGCTGGT GTGAATTTAC CGTTATCTAT CTTGCCTGCC TGAAAATCGG TGCGGTTTCC
GTGCCGCTGT TGCCTTCCTG GCGGGAAGCA GAACTGGTGT GGGTGCTCAA TAAGTGTCAG
GCAAAAATGT TCTTTGCACC GACGTTGTTT AAACAAACGC GTCCGGTAGA TTTAATCCTG
CCGCTGCAAA ATCAGCTTCC ACAACTACAA CAAATTGTCG GCGTGGACAA ACTGGCTCCC
GCCACCTCTT CCCTCTCATT AAGTCAGATT ATCGCCGACA ATATCCCACT GACCACGGCG
ATAACGACCC ACGGCGATGA ATTAGCTGCG GTGCTGTTTA CCTCCGGAAC CGAGGGTCTG
CCAAAGGGCG TGATGCTAAC GCATAACAAT ATTCTCGCCA GTGAGCGGGC TTATTGCGCG
CGGCTGAATC TGACCTGGCT GGATGTATTT ATGATGCCTG CGCCACTTGG TCACGCAACG
GGATTTCTGC ATGGCGTAAC AGCACCATTT TTAATTGGTG CTCGCAGCGT GTTGTTAGAT
ATTTTCACTC CTGATGCGTG TCTCGCGCTG CTTGAGCAGC AGCGTTGCAC CTGTATGCTA
GGCGCAACGC CGTTTGTCTA TGATCTTTTG AATTTACTAG AGAAACAACC CGCAGACCTT
TCAGCGCTGC GCTTCTTTCT TTGCGGCGGT ACCACAATCC CCAAAAAAGT GGCGCGTGAA
TGTCAGCAGC TCGGCATTAA ATTATTAAGT GTTTATGGTT CCACAGAAAG TTCGCCGCAT
GCGGTGGTGA ATCTCGATGA TCCTTTGTCG CGCTTTATGC ACACCGATGG TTACGCTGCC
GCAGGTGTAG AGATTAAAGT GGTCAATGAC GCACGCAAGA CCTTACCGCC AGGTTGCGAA
GGTGAAGAAG CCTCGCGTGG CCCCAATGTG TTTATGGGGT ATTTTGATGA ACCTGAATTA
ACCGCCCGTG CGCTGGACGA AGAAGGCTGG TATTACAGCG GCGATCTCTG CCGCATGGAT
GAGGCTGGCT ATATAAAAAT TACCGGACGC AAAAAAGATA TTATTGTCCG CGGCGGCGAA
AATATTAGCA GCCGTGAAGT GGAAGATATT TTATTGCAGC ATCCTAAAAT TCACGATGCC
TGTGTGGTTG CAATGCCCGA TGAACGTTTA GGTGAACGAT CATGCGCTTA TGTCGTGCTG
AAAGCGCCGC ATCATTCATT ATCGCTGGAA GAGGTGGTGG CTTTTTTTAG CCGTAAACGG
GTCGCAAAAT ATAAATATCC TGAACATATC GTGGTAATCG AAAAACTACC GCGCACTGCC
TCAGGTAAAA TACAAAAGTT TTTGTTAAGA AAAGATATTA TGCGGCGGTT AACTCAGGAT
GCCTGTGAAG AGATTGAATA A
|
|---|
| Protein sequence | MHPTGPHLGP DVLFRESKMK VTLTFNEQRR AAYRQQGLWG DASLADYWQQ TARAMPDKIA
VVDNHGATYT YSALDHAASC LANWMLAKGI ESGDRIAFQL PGWCEFTVIY LACLKIGAVS
VPLLPSWREA ELVWVLNKCQ AKMFFAPTLF KQTRPVDLIL PLQNQLPQLQ QIVGVDKLAP
ATSSLSLSQI IADNIPLTTA ITTHGDELAA VLFTSGTEGL PKGVMLTHNN ILASERAYCA
RLNLTWLDVF MMPAPLGHAT GFLHGVTAPF LIGARSVLLD IFTPDACLAL LEQQRCTCML
GATPFVYDLL NLLEKQPADL SALRFFLCGG TTIPKKVARE CQQLGIKLLS VYGSTESSPH
AVVNLDDPLS RFMHTDGYAA AGVEIKVVND ARKTLPPGCE GEEASRGPNV FMGYFDEPEL
TARALDEEGW YYSGDLCRMD EAGYIKITGR KKDIIVRGGE NISSREVEDI LLQHPKIHDA
CVVAMPDERL GERSCAYVVL KAPHHSLSLE EVVAFFSRKR VAKYKYPEHI VVIEKLPRTA
SGKIQKFLLR KDIMRRLTQD ACEEIE
|
|---|
| |