| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_01565 |
|---|
| Symbol | ydgB |
|---|
| ID | 8113784 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012892 |
|---|
| Strand | + |
|---|
| Start bp | 1625582 |
|---|
| End bp | 1626304 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644847795 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002999368 |
|---|
| Protein GI | 251785064 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.740406 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTAAAA CCCAGCCCTT GCCAATATTA ATTACTGGCG GAGGTCGTCG CATCGGCCTC
GCCCTCGCAT GGCATTTCAT TAATCAAAAG CAACCGGTGA TTGTCAGCTA TCGGACACAC
TATCCAGCCA TTGATGGACT GATTAATGCA GGTGCGCAGT GTATTCAGGC TGATTTTTCG
ACCAACGACG GTGTGATGGC GTTTGCCGAT GAAGTACTAA AAAGCACCCA TGGTCTGCGT
GCTATTTTGC ATAACGCCAG TGCGTGGATG GCGGAAAAAC CGGGTGCGCC ACTGGCCGAC
GTACTGGCTT GCATGATGCA GATCCACGTT AATACCCCAT ACCTGCTCAA CCATGCGCTG
GAAAGATTAC TGCGTGGGCA CGGACACGCC GCCAGCGATA TCATTCACTT TACCGATTAT
GTGGTGGAGC GCGGTAGCGA CAAACATATT GCGTATGCTG CAAGCAAAGC GGCACTGGAT
AATATGACCC GCTCGTTTGC CCGCAAGCTG GCACCGGAAG TGAAAGTGAA TTCTATTGCG
CCATCGCTGA TCCTGTTTAA TGAACATGAT GATGCCGAAT ATCGACAACA GGCGCTGAAT
AAATCACTGA TGAAAACCGC GCCTGGCGAG AAAGAAGTGA TCGACCTGGT CGATTACTTA
CTTACCAGTT GCTTTGTCAC CGGACGCAGT TTCCCACTTG ATGGCGGTCG TCATCTGCGT
TAA
|
|---|
| Protein sequence | MGKTQPLPIL ITGGGRRIGL ALAWHFINQK QPVIVSYRTH YPAIDGLINA GAQCIQADFS
TNDGVMAFAD EVLKSTHGLR AILHNASAWM AEKPGAPLAD VLACMMQIHV NTPYLLNHAL
ERLLRGHGHA ASDIIHFTDY VVERGSDKHI AYAASKAALD NMTRSFARKL APEVKVNSIA
PSLILFNEHD DAEYRQQALN KSLMKTAPGE KEVIDLVDYL LTSCFVTGRS FPLDGGRHLR
|
|---|
| |