| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_01426 |
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| Symbol | rhsDE |
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| ID | 8116142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli BL21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012892 |
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| Strand | + |
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| Start bp | 1481789 |
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| End bp | 1485439 |
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| Gene Length | 3651 bp |
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| Protein Length | 1216 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644847669 |
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| Product | hypothetical protein |
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| Protein accession | YP_002999242 |
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| Protein GI | 251784938 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTACCGGGTG CTGAGGACGT ACTGCCAGCG CCGCTGCCGC CGTACCGGGT GCTTACCGGG
CTGGCAGACC GTTTCGGGCG GACGCTGACG TACCGGCGTG AGGCCGCAGG CGACCTGGCC
GGGGAAATCA CCGGCGTGAC GGACGGTGCC GGGCGGGAGT TCCGTCTGGT GCTGACCACG
CAGGCGCAGC GTGCGGAAGA GGCCCGCACC TCTTCGCTAT CTTCTTCTGA CAGTTCCCGC
CCTCTCTCAG CCTCAGCGTT CCCCGACACA CTGCCCGGTA CCGAATACGG CCCCGACAGG
GGTATCCGCC TTTCGGCGGT GTGGCTGATG CACGACCCGG CATACCCGGA GAGCCTGCCC
GCTGCGCCAC TGGTGCGGTA CACGTATACG GAAGCCGGTG AACTGCTGGC GGTATATGAC
CGCAGCAATA CGCAGGTGCG CGCTTTCACG TATGACGCGC AGCACCCGGG CCGGATGGTG
GCGCACCGTT ACGCGGGAAG GCCGGAGATG CGCTACCGCT ACGACGATAC GGGGCGGGTG
GTGGAGCAAC TGAACCCGGC AGGGTTAAGC TACCGCTATC TTTATGAGCA GGACCGCATC
ACCGTCACCG ACAGCCTGAA CCGGCGTGAG GTGCTGCATA CAGAAGGCGG GGCCGGGCTG
AAACGGGTGG TGAAAAAAGA ACTGGCGGAC GGCAGCGTCA CGCGCAGCGG GTATGACGCG
GCAGGAAGGC TCACGGCGCA GACGGACGCG GCGGGACGGA GGACAGAGTA CGGTCTGAAT
GTGGTGTCCG GCGATATCAC GGACATCACC ACACCGGACG GGCGGGAGAC GAAATTTTAC
TATAACGACG GGAACCAGCT GACGGCGGTG GTGTACCCGG ACGGGCTGGA GAGCCGCCGG
GAATATGATG AACCGGGCAG GCTGGTATCG GAGACATCGC GCAGCGGGGA GACAGTACGC
TACCGCTACG ATGACGCGCA CAGTGAGTTA CCGGCGACGA CAACGGATGC GACGGGCAGC
ACCCGGCAGA TGACGTGGAG CCGCTACGGG CAGTTGCTGG CGTTCACTGA CTGCTCGGGC
TACCAGACCC GCTATGAATA CGACCGCTTC GGCCAGATGA CGGCGGTTCA CCGCGAGGAA
GGTATCAGCC TTTACCGCCA CTATGACAAC CGTGGCCGGT TAACCTCGGT GAAAGACGCA
CAGGGCCGTG AAACGCGGTA TGAATACAAC GCCGCAGGCG ACCTGACTGC CGTCATTACC
CCGGACGGCA ACCGGAGCGA GACACAGTAC GATGCGTGGG GAAAGGCGGT CAGCACCACG
CAGGGCGGGC TGACGCGCAG TATGGAGTAC GATGCTGCCG GACGTGTCAT CAGCCTGACC
AACGAGAACG GCAGCCACAG CGTCTTCAGT TACGATGCGC TGGACCGGCT GGTACAGCAG
GGCGGCTTTG ACGGGCGGAC GCAACGTTAT CATTATGACC TGACCGGAAA ACTCACGCAG
AGTGAGGATG AGGGACTTGT CATCCTCTGG TACTACGATG CGTCGGACCG CATCACGCAC
CGCACGGTGA ACGGCGAACC GGCAGAGCAG TGGCAGTATG ATGGCCACGG CTGGCTGACA
GACATCAGCC ACCTGAGCGA AGGCCACCGT GTTGCCGTCC ACTATGGCTA TGACGATAAA
GGCCGCCTGA CCGGCGAATG CCAGACGGTG GAGAACCCGG AGACGGGGGA ACTGCTGTGG
CAGCATGAGA CGAAACACGC ATACAACGAG CAGGGGCTGG CAAACCGCGT CACGCCGGAC
AGCCTGCCGC CGGTGGAGTG GCTGACGTAT GGCAGCGGTT ACCTGGCGGG CATGAAGCTG
GGCGGGACGC CGCTGGTCGA GTATACGCGG GACAGGCTGC ACCGTGAGAC GGTGCGCAGC
TTCGGCAGCA TGGCAGGCAG TAATGCCGCA TACGAACTGA CCAGCACATA CACCCCCGCA
GGCCAGTTAC AGAGCCAGCA CCTGAACAGC CTGGTATATG ACCGTGACTA CGGGTGGAGT
GACAACGGCG ACCTGGTGCG CATCAGCGGC CCGCGACAGA CGCGGGAATA CGGCTACAGC
GCCACGGGCA GGCTGGAGAG TGTGCGCACC CTCGCACCAG ACCTGGACAT CCGCATCCCG
TATGCCACGG ACCCGGCGGG CAACCGGCTG CCGGACCCGG AGCTGCACCC GGACAGTACA
CTCACAGTGT GGCCGGATAA CCGCATCGCG GAGGATGCGC ACTATGTCTA CCGCCACGAT
GAATACGGCA GGCTGACGGA GAAGACGGAC CGCATCCCGG CGGGTGTTAT CCGGACGGAC
GACGAGCGGA CCCACCACTA CCACTACGAC AGCCAGCACC GCCTGGTGTT CTACACGCGG
ATACAGCATG GCGAGCCACT GGTCGAGAGC CGCTACCTCT ACGACCCGCT GGGACGGCGA
ATGGCAAAAC GGGTCTGGCG GCGGGAGCGT GACCTGACGG GGTGGATGTC GCTGTCGCGT
AAACCGGAGG TGACGTGGTA TGGCTGGGAC GGAGACAGGC TGACGACGGT GCAGACTGAC
ACCACACGTA TCCAGACGGT ATACGAGCCG GGAAGCTTCA CGCCGCTCAT CCGGGTCGAG
ACAGAGAACG GCGAGCGGGA AAAAGCGCAG CGGCGCAGCC TGGCAGAGAC GCTCCAGCAG
GAAGGGAGTG AGAACGGCCA CGGCGTGGTG TTCCCGGCTG AACTGGTGCG GCTGCTGGAC
AGGCTGGAGG AAGAAATCCG GGCAGACCGC GTGAGCAGTG AAAGCCGGGC GTGGCTTGCG
CAGTGCGGGC TGACGGTGGA GCAACTGGCC AGACAGGTGG AGCCGGAATA CACACCGGCG
CGAAAAGTTC ATTTTTACCA CTGCGACCAC CGGGGCCTGC CGCTGGCGCT CATCAGCGAA
GACGGCAATA CGGCGTGGCG CGGGGAGTAT GATGAATGGG GCAACCAGCT TAATGAGGAG
AACCCGCATC ACCTGCACCA GCCGTACCGT CTGCCAGGGC AGCAGCATGA TGAGGAGTCG
GGGCTGTACT ATAACCGTCA CCGGCACTAC GATCCGTTGC AGGGGCGGTA TATCACCCCG
GACCCGATTG GGTTGAGAGG TGGATGGAAT ATGTATCAGT ATCCGTTGAA TCCCATACAA
GTGATAGACC CAATGGGGTT AGATGCGATT GAGAATATGA CATCAGGTGG ACTAATTTAT
GCCGTATCTG GTGTACCTGG ATTGATTGCT GCAAACAGCA TTACTAACAG TGCTTACCAG
TTCGGTTATG ATATGGATGC TATTGTTGGC GGAGCTCATA ATGGGGCCGC CGATGCAATG
AGACATTGTT ACTTGATGTG TCGAATGACT AAGACATTTG GATCAACAAT AGCTGACGTG
ATAGGTAAAA ATCATGAGGC GGCAGGGGAT AGACAAGGTC AGCCAGCTAA AAAAAGAATC
ATGGATCTTA AAAATAACAC TGTCGGTATT GCTTGTGGCG ATTTTTCTGC CAAATGTAGC
GATGCATGTA TTGAAAAATA TAACACTGGG CAACTCTTCG GGTTAGATGG TATAAAAGCA
GATAATCCAA TAAAAGCAAA GCAAGGGAGT TCAGATGCTT CAAATTATTA G
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| Protein sequence | VPGAEDVLPA PLPPYRVLTG LADRFGRTLT YRREAAGDLA GEITGVTDGA GREFRLVLTT
QAQRAEEART SSLSSSDSSR PLSASAFPDT LPGTEYGPDR GIRLSAVWLM HDPAYPESLP
AAPLVRYTYT EAGELLAVYD RSNTQVRAFT YDAQHPGRMV AHRYAGRPEM RYRYDDTGRV
VEQLNPAGLS YRYLYEQDRI TVTDSLNRRE VLHTEGGAGL KRVVKKELAD GSVTRSGYDA
AGRLTAQTDA AGRRTEYGLN VVSGDITDIT TPDGRETKFY YNDGNQLTAV VYPDGLESRR
EYDEPGRLVS ETSRSGETVR YRYDDAHSEL PATTTDATGS TRQMTWSRYG QLLAFTDCSG
YQTRYEYDRF GQMTAVHREE GISLYRHYDN RGRLTSVKDA QGRETRYEYN AAGDLTAVIT
PDGNRSETQY DAWGKAVSTT QGGLTRSMEY DAAGRVISLT NENGSHSVFS YDALDRLVQQ
GGFDGRTQRY HYDLTGKLTQ SEDEGLVILW YYDASDRITH RTVNGEPAEQ WQYDGHGWLT
DISHLSEGHR VAVHYGYDDK GRLTGECQTV ENPETGELLW QHETKHAYNE QGLANRVTPD
SLPPVEWLTY GSGYLAGMKL GGTPLVEYTR DRLHRETVRS FGSMAGSNAA YELTSTYTPA
GQLQSQHLNS LVYDRDYGWS DNGDLVRISG PRQTREYGYS ATGRLESVRT LAPDLDIRIP
YATDPAGNRL PDPELHPDST LTVWPDNRIA EDAHYVYRHD EYGRLTEKTD RIPAGVIRTD
DERTHHYHYD SQHRLVFYTR IQHGEPLVES RYLYDPLGRR MAKRVWRRER DLTGWMSLSR
KPEVTWYGWD GDRLTTVQTD TTRIQTVYEP GSFTPLIRVE TENGEREKAQ RRSLAETLQQ
EGSENGHGVV FPAELVRLLD RLEEEIRADR VSSESRAWLA QCGLTVEQLA RQVEPEYTPA
RKVHFYHCDH RGLPLALISE DGNTAWRGEY DEWGNQLNEE NPHHLHQPYR LPGQQHDEES
GLYYNRHRHY DPLQGRYITP DPIGLRGGWN MYQYPLNPIQ VIDPMGLDAI ENMTSGGLIY
AVSGVPGLIA ANSITNSAYQ FGYDMDAIVG GAHNGAADAM RHCYLMCRMT KTFGSTIADV
IGKNHEAAGD RQGQPAKKRI MDLKNNTVGI ACGDFSAKCS DACIEKYNTG QLFGLDGIKA
DNPIKAKQGS SDASNY
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