| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_01408 |
|---|
| Symbol | ydcS |
|---|
| ID | 8114868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012892 |
|---|
| Strand | + |
|---|
| Start bp | 1465126 |
|---|
| End bp | 1466271 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644847651 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002999224 |
|---|
| Protein GI | 251784920 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGA CATTTGCCCG CAGCAGCCTG TGTGCGCTCA GCATGACAAT AATGACCGCT
CACGCCGCCG AACCGCCTAC CAATTTAGAT AAACCGGAAG GGCGACTGGA TATTATCGCC
TGGCCGGGAT ACATCGAACG CGGACAAACT GATAAACAAT ACGACTGGGT AACGCAGTTC
GAAAAAGAGA CAGGCTGCGC GGTGAATGTG AAAACCGCCG CGACTTCCGA TGAAATGGTC
AGTCTGATGA CCAAAGGGGG TTACGATCTG GTTACGGCAT CCGGCGATGC CTCGCTGCGT
TTGATTATGG GTAAACGCGT GCAGCCGATT AATACCGCAT TGATTCCCAA CTGGAAAACG
CTCGATCCGC GCGTGGTTAA AGGCGACTGG TTTAATGTTG GCGGCAAAGT TTACGGCACA
CCTTACCAAT GGGGGCCGAA CCTGCTGATG TACAACACTA AAACCTTCCC GACGCCGCCG
GATAGCTGGC AAGTGGTTTT TGTTGAGCAA AATCTGCCGG ACGGCAAGAG CAATAAAGGC
CGCGTTCAGG CTTATGATGG CCCTATCTAC ATTGCGGACG CTGCGTTGTT CGTTAAAGCC
ACTCAGCCGC AGTTGGGCAT CAGCGATCCG TATCAACTCA CCGAAGAACA GTACCAGGCG
GTGCTGAAAG TGCTGCGCGC TCAACACAGT TTGATCCATC GCTACTGGCA TGACACTACC
GTGCAAATGA GCGATTTCAA AAACGAGGGT GTGGTTGCTT CCAGTGCCTG GCCCTATCAG
GCCAACGCCC TGAAAGCCGA AGGCCAGCCT GTTGCTACCG TTTTCCCGAA GGAGGGTGTT
ACCGGTTGGG CTGATACCAC CATGCTGCAT AGCGAAGCGA AACATCCGGT TTGCGCCTAC
AAATGGATGA ACTGGTCATT AACGCCAAAA GTGCAGGGCG ATGTGGCGGC CTGGTTTGGC
TCGTTACCGG TAGTGCCGGA AGGGTGTAAA GCCAGTCCGT TATTAGGCGA AAAAGGTTGT
GAAACCAACG GTTTTAACTA TTTCGACAAA ATCGCCTTCT GGAAAACGCC TATAGCAGAA
GGGGGCAAGT TTGTTCCCTA CAGTCGCTGG ACGCAGGATT ACATTGCCAT TATGGGCGGT
CGCTAA
|
|---|
| Protein sequence | MSKTFARSSL CALSMTIMTA HAAEPPTNLD KPEGRLDIIA WPGYIERGQT DKQYDWVTQF
EKETGCAVNV KTAATSDEMV SLMTKGGYDL VTASGDASLR LIMGKRVQPI NTALIPNWKT
LDPRVVKGDW FNVGGKVYGT PYQWGPNLLM YNTKTFPTPP DSWQVVFVEQ NLPDGKSNKG
RVQAYDGPIY IADAALFVKA TQPQLGISDP YQLTEEQYQA VLKVLRAQHS LIHRYWHDTT
VQMSDFKNEG VVASSAWPYQ ANALKAEGQP VATVFPKEGV TGWADTTMLH SEAKHPVCAY
KWMNWSLTPK VQGDVAAWFG SLPVVPEGCK ASPLLGEKGC ETNGFNYFDK IAFWKTPIAE
GGKFVPYSRW TQDYIAIMGG R
|
|---|
| |