Gene B21_01400 details

Gene Information

• Locus tag: B21_01400
• Symbol: ydcM
• ID: 8114862
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli BL21
• Kingdom: Bacteria
• Replicon accession: NC_012892
• Strand: +
• Start bp: 1457129
• End bp: 1458337
• Gene Length: 1209 bp
• Protein Length: 402 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 644847643
• Product: hypothetical protein
• Protein accession: YP_002999216
• Protein GI: 251784912
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0675] Transposase and inactivated derivatives
• TIGRFAM ID: [TIGR01766] transposase, IS605 OrfB family, central region

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAACGAT TACAGGCATT TAAATTCCAG TTAAGACCAG GTGGTCAACA GGAGTGTGAA 
ATGAGGCGCT TCGCAGGCGC ATGTCGTTTC GTTTTCAATC GTGCTCTGGC ACGTCAGAAT 
GAGAATCATG AGGCCGGTAA TAAATACATC CCTTACGGGA AAATGGCTTC CTGGCTGGTT 
GAGTGGAAAA ATGCCACTGA AACGCAATGG CTTAAAGATT CTCCCTCACA GCCATTGCAA 
CAGTCACTGA AAGACCTTGA GCGGGCTTAC AAAAACTTCT TCCGGAAGCG GGCTGCTTTT 
CCCCGATTCA AAAAGCGGGG ACAGAATGAT GCATTCCGCT ACCCGCAGGG CGTTAAGCTC 
GATCAGGAAA ACAGCCGTAT TTTTCTGCCG AAACTGGGCT GGATGCGCTA CCGGAACAGC 
CGTCAGGTCA CGGGTGTTGT GAAAAATGTC ACTGTCAGCC AGTCCTGCGG TAAGTGGTAC 
ATCAGTATTC AGACAGAAAG TGAAGTATCA ACTCCGGTTC ACCCTTCAGC ATCAATGGTC 
GGGCTGGATG CTGGCGTGGC TAAACTCGCC ACGCTGTCAG ATGGCACAGT CTTTGAGCCT 
GTAAACAGTT TTCAGAAAAA CCAGAAGAAG CTGGCGAGAC TTCAGCGACA GTTAAGCCGC 
AAGGTCAAAT TCAGCAACAA CTGGCAAAAG CAGAAACGCA AAATACAGCG ACTGCATTCC 
TGTATCGCAA ATATCCGCAG GGACTACCTT CACAAAGTCA CAACGGCCGT CAGCAAAAAC 
CACGCAATGA TAGTCATTGA GGATTTGAAG GTCAGCAACA TGTCAAAGTC AGCAGCGGGT 
ACGGTCAGCC AGCCGGGGCG CAATGTCCGG GCAAAATCAG GTTTAAACCG TTCGATACTG 
GATCAGGGCT GGTATGAAAT GCGCCGCCAG CTTGCGTACA AGCAGCTCTG GCGTGGCGGT 
CAGGTGCTTG CTGTTCCGCC AGCGTATACA AGCCAGCGTT GCGCGTACTG TGGTCATACA 
GCGAAAGAGA ACCGCCTGTC ACAAAGTAAA TTCAGATGCC AGGTATGTGG ATATACAGCG 
AACGCCGATG TAAATGGCGC TCGCAACATT TTAGCGGCGG GGCACGCCGT TCTTGCCTGT 
GGAGAGATGG TGCAGTCAGG CCGCCCGTTG AAGCAGGAAC CCACCGAAAT GATTCAGGCG 
ACAGCCTGA 

 

Protein sequence

MKRLQAFKFQ LRPGGQQECE MRRFAGACRF VFNRALARQN ENHEAGNKYI PYGKMASWLV 
EWKNATETQW LKDSPSQPLQ QSLKDLERAY KNFFRKRAAF PRFKKRGQND AFRYPQGVKL 
DQENSRIFLP KLGWMRYRNS RQVTGVVKNV TVSQSCGKWY ISIQTESEVS TPVHPSASMV 
GLDAGVAKLA TLSDGTVFEP VNSFQKNQKK LARLQRQLSR KVKFSNNWQK QKRKIQRLHS 
CIANIRRDYL HKVTTAVSKN HAMIVIEDLK VSNMSKSAAG TVSQPGRNVR AKSGLNRSIL 
DQGWYEMRRQ LAYKQLWRGG QVLAVPPAYT SQRCAYCGHT AKENRLSQSK FRCQVCGYTA 
NADVNGARNI LAAGHAVLAC GEMVQSGRPL KQEPTEMIQA TA