Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | B21_01371 |
Symbol | tynA |
ID | 8115426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21 |
Kingdom | Bacteria |
Replicon accession | NC_012892 |
Strand | - |
Start bp | 1424044 |
End bp | 1425996 |
Gene Length | 1953 bp |
Protein Length | 650 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644847616 |
Product | hypothetical protein |
Protein accession | YP_002999189 |
Protein GI | 251784885 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3733] Cu2+-containing amine oxidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTTTTCCAGT CCGGGCTGGA TCAAACCTTT CAGGTAGAAA AGCGCCCTCA CCCACTTAAT GCGCTAACTG CGGACGAAAT TAAACAGGCC GTTGAAATTG TTAAAGCTTC CGCGGACTTC AAACCCAATA CCCGTTTTAC TGAGATCTCC CTGCTACCGC CAGATAAAGA AGCTGTCTGG GCGTTTGCGC TGGAAAACAA ACCGGTTGAC CAGCCGCGCA AAGCCGACGT CATTATGCTC GACGGCAAAC ATATCATCGA AGCGGTGGTG GATCTGCAAA ACAACAAACT GCTCTCCTGG CAACCCATTA AAGACGCCCA CGGTATGGTG TTGCTGGATG ATTTCGCCAG TGTGCAGAAC ATTATTAACA ACAGTGAAGA ATTTGCCGCT GCCGTGAAGA AACGCGGTAT TACTGATGCG AAAAAAGTGA TTACCACGCC GCTGACCGTA GGTTATTTCG ATGGTAAAGA TGGCCTGAAA CAAGATGCCC GGTTGCTCAA AGTCATCAGC TATCTTGATG TCGGTGATGG CAACTACTGG GCACATCCCA TCGAAAACCT GGTGGCGGTC GTTGATTTAG AACAGAAAAA AATCGTTAAG ATTGAAGAAG GTCCGGTAGT TCCGGTGCCA ATGACCGCAC GCCCATTTGA TGGCCGTGAC CGCGTTGCTC CGGCAGTTAA GCCTATGCAA ATCATTGAGC CTGAAGGTAA AAATTACACC ATTACTGGCG ATATGATTCA CTGGCGGAAC TGGGATTTTC ACCTCAGCAT GAACTCTCGC GTCGGGCCGA TGATCTCCAC CGTGACTTAT AACGACAATG GCACCAAACG CAAAGTCATG TACGAAGGTT CTCTCGGCGG CATGATTGTG CCTTACGGTG ATCCTGATAT TGGCTGGTAC TTTAAAGCGT ATCTGGACTC TGGTGACTAC GGTATGGGCA CACTAACCTC ACCAATTGCT CGTGGTAAAG ATGCCCCGTC TAACGCAGTG CTCCTTAATG AAACCATCGC CGACTACACT GGCGTGCCGA TGGAGATCCC TCGCGCTATC GCGGTATTTG AACGTTATGC CGGGCCGGAG TATAAGCATC AGGAAATGGG CCAGCCCAAC GTCAGTACCG AACGCCGGGA GTTAGTGGTG CGCTGGATCA GTACAGTGGG TAACTATGAC TACATTTTTG ACTGGATCTT CCATGAAAAC GGCACTATTG GCATCGATGC CGGTGCTACG GGCATCGAAG CGGTGAAAGG TGTTAAAGCG AAAACCATGC ACGATGAGAC GGCGAAAGAT GACACGCGCT ACGGCACGCT TATCGATCAC AATATCGTGG GTACTACACA CCAACATATT TATAATTTCC GCCTCGATCT GGATGTAGAT GGCGAGAATA ACAGCCTGGT GGCGATGGAC CCAGTGGTAA AACCGAATAC TGCCGGTGGC CCACGCACCA GTACCATGCA AGTTAATCAG TACAACATCG GCAATGAACA GGATGCCGCA CAGAAATTTG ATCCGGGCAC GATTCGTCTG TTGAGTAACC CGAACAAAGA GAACCGCATG GGCAATCCAG TTTCCTATCA AATTATTCCT TATGCAGGTG GTACTCACCC GGTAGCAAAA GGTGCCCAGT TCGCGCCGGA CGAGTGGATC TATCATCGTT TAAGCTTTAT GGACAAGCAG CTTTGGGTAA CGCGTTATCA TCCTGGCGAG CGTTTCCCGG AAGGCAAATA TCCGAACCGT TCTACTCATG ACACCGGTCT TGGACAATAC AGTAAGGATA ACGAGTCGCT GGACAACACC GACGCCGTTG TCTGGATGAC CACCGGCACC ACACATGTGG CCCGCGCCGA AGAGTGGCCG ATTATGCCGA CCGAATGGGT ACATACTCTG CTGAAACCAT GGAACTTCTT TGACGAAACG CCAACGCTAG GGGCGCTGAA GAAAGATAAT TGA
|
Protein sequence | VFQSGLDQTF QVEKRPHPLN ALTADEIKQA VEIVKASADF KPNTRFTEIS LLPPDKEAVW AFALENKPVD QPRKADVIML DGKHIIEAVV DLQNNKLLSW QPIKDAHGMV LLDDFASVQN IINNSEEFAA AVKKRGITDA KKVITTPLTV GYFDGKDGLK QDARLLKVIS YLDVGDGNYW AHPIENLVAV VDLEQKKIVK IEEGPVVPVP MTARPFDGRD RVAPAVKPMQ IIEPEGKNYT ITGDMIHWRN WDFHLSMNSR VGPMISTVTY NDNGTKRKVM YEGSLGGMIV PYGDPDIGWY FKAYLDSGDY GMGTLTSPIA RGKDAPSNAV LLNETIADYT GVPMEIPRAI AVFERYAGPE YKHQEMGQPN VSTERRELVV RWISTVGNYD YIFDWIFHEN GTIGIDAGAT GIEAVKGVKA KTMHDETAKD DTRYGTLIDH NIVGTTHQHI YNFRLDLDVD GENNSLVAMD PVVKPNTAGG PRTSTMQVNQ YNIGNEQDAA QKFDPGTIRL LSNPNKENRM GNPVSYQIIP YAGGTHPVAK GAQFAPDEWI YHRLSFMDKQ LWVTRYHPGE RFPEGKYPNR STHDTGLGQY SKDNESLDNT DAVVWMTTGT THVARAEEWP IMPTEWVHTL LKPWNFFDET PTLGALKKDN
|
| |