Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | B21_01280 |
Symbol | sapC |
ID | 8116710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21 |
Kingdom | Bacteria |
Replicon accession | NC_012892 |
Strand | - |
Start bp | 1339406 |
End bp | 1340290 |
Gene Length | 885 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644847529 |
Product | hypothetical protein |
Protein accession | YP_002999102 |
Protein GI | 251784798 |
COG category | [V] Defense mechanisms |
COG ID | [COG4171] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.675817 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTTACG ATAGCGTATA CAGCGAAAAG CGCCCGCCGG GCACGCTGCG TACCGCCTGG CGCAAATTTT ATAGTGACGC CTCTGCGATG GTCGGCCTGT ACGGCTGCGC GGGGCTGGCT GTACTGTGTA TTTTTGGCGG CTGGTTTGCG CCTTACGGCA TCGACCAGCA ATTTCTCGGT TATCAATTAT TGCCGCCGTC ATGGTCGCGC TATGGCGAAG TTTCTTTCTT CCTGGGGACT GACGACCTCG GACGCGATGT TTTAAGCCGT TTACTGAGCG GAGCTGCGCC AACCGTGGGT GGCGCATTTG TGGTGACGCT TGCCGCGACG ATCTGTGGCC TGGTACTGGG CACCTTCGCC GGGGCGACAC ACGGCCTCCG CTCAGCGGTG CTTAACCATA TTCTGGATAC CTTACTGGCG ATCCCTTCGC TGCTGTTGGC AATTATCGTT GTAGCGTTTG CCGGACCGAG TTTGTCCCAC GCTATGTTTG CTGTCTGGCT GGCATTGCTG CCGCGTATGG TACGTTCGAT TTACAGCATG GTGCATGACG AACTGGAAAA AGAGTACGTT ATCGCCGCCC GTCTGGATGG CGCATCAACG CTGAATATTC TCTGGTTTGC TGTGATGCCA AACATCACCG CCGGGCTGGT CACCGAGATC ACCCGCGCAC TGTCGATGGC AATTCTCGAT ATCGCCGCGC TGGGCTTTCT CGATCTCGGC GCACAACTCC CCTCGCCTGA ATGGGGAGCG ATGCTCGGTG ATGCGCTGGA ACTGATTTAT GTCGCCCCGT GGACTGTCAT GCTGCCAGGT GCGGCAATTA TGATTAGCGT GTTGTTGGTT AACCTCCTTG GCGATGGCGT TCGTCGTGCG ATTATTGCGG GGGTG
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Protein sequence | MPYDSVYSEK RPPGTLRTAW RKFYSDASAM VGLYGCAGLA VLCIFGGWFA PYGIDQQFLG YQLLPPSWSR YGEVSFFLGT DDLGRDVLSR LLSGAAPTVG GAFVVTLAAT ICGLVLGTFA GATHGLRSAV LNHILDTLLA IPSLLLAIIV VAFAGPSLSH AMFAVWLALL PRMVRSIYSM VHDELEKEYV IAARLDGAST LNILWFAVMP NITAGLVTEI TRALSMAILD IAALGFLDLG AQLPSPEWGA MLGDALELIY VAPWTVMLPG AAIMISVLLV NLLGDGVRRA IIAGV
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