Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | B21_01200 |
Symbol | kdsA |
ID | 8116037 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21 |
Kingdom | Bacteria |
Replicon accession | NC_012892 |
Strand | + |
Start bp | 1255720 |
End bp | 1256574 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644847452 |
Product | hypothetical protein |
Protein accession | YP_002999025 |
Protein GI | 251784721 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.785564 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAAA AAGTGGTTAG CATTGGCGAC ATCAACGTAG CAAATGACCT GCCGTTCGTA CTGTTTGGCG GTATGAACGT GCTGGAATCT CGCGATCTGG CGATGCGCAT TTGCGAGCAC TACGTAACCG TGACCCAGAA ACTGGGTATC CCTTACGTGT TCAAAGCCTC TTTTGACAAA GCCAACCGCT CCTCCATCCA CTCTTATCGT GGACCGGGCC TGGAAGAAGG GATGAAAATC TTCCAGGAGT TGAAGCAGAC TTTTGGCGTG AAAATTATCA CCGACGTTCA CGAACCAAGT CAGGCACAGC CCGTTGCTGA TGTCGTGGAT GTGATTCAGT TGCCGGCGTT TCTTGCTCGC CAGACTGACC TGGTTGAAGC CATGGCGAAA ACCGGTGCGG TAATTAACGT CAAGAAACCA CAGTTTGTCA GCCCGGGACA GATGGGTAAT ATCGTTGATA AATTCAAAGA AGGCGGCAAC GAAAAAGTGA TTCTTTGCGA TCGCGGTGCT AACTTCGGCT ATGACAACCT GGTTGTCGAT ATGCTGGGCT TCAGCATTAT GAAGAAAGTG TCTGGTAACT CGCCGGTGAT TTTCGACGTG ACCCACGCAC TGCAATGCCG CGATCCTTTT GGCGCAGCTT CCGGCGGTCG TCGTGCTCAG GTGGCTGAGC TGGCACGAGC CGGTATGGCG GTAGGTCTGG CAGGGCTGTT TATTGAAGCG CATCCGGATC CGGAACATGC GAAATGTGAT GGTCCATCCG CGCTGCCGCT GGCTAAACTG GAACCGTTCC TCAAGCAGAT GAAAGCGATT GATGATCTGG TGAAAGGTTT CGAAGAACTG GATACCAGCA AGTAA
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Protein sequence | MKQKVVSIGD INVANDLPFV LFGGMNVLES RDLAMRICEH YVTVTQKLGI PYVFKASFDK ANRSSIHSYR GPGLEEGMKI FQELKQTFGV KIITDVHEPS QAQPVADVVD VIQLPAFLAR QTDLVEAMAK TGAVINVKKP QFVSPGQMGN IVDKFKEGGN EKVILCDRGA NFGYDNLVVD MLGFSIMKKV SGNSPVIFDV THALQCRDPF GAASGGRRAQ VAELARAGMA VGLAGLFIEA HPDPEHAKCD GPSALPLAKL EPFLKQMKAI DDLVKGFEEL DTSK
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