| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_01141 |
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| Symbol | ymfC |
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| ID | 8116470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli BL21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012892 |
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| Strand | - |
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| Start bp | 1197082 |
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| End bp | 1197726 |
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| Gene Length | 645 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644847395 |
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| Product | hypothetical protein |
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| Protein accession | YP_002998968 |
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| Protein GI | 251784664 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGGCAAT TCATAATCTC TGAAAATACC ATGCAAAAAA CTTCTTTTAG AAATCACCAG
GTTAAGCGAT TCAGCTCGCA ACGTTCTACC AGGCGTAAAC CTGAAAACCA GCCCACGCGT
GTGATCCTCT TCAATAAACC CTACGATGTT CTTCCGCAGT TCACCGATGA AGCCGGACGC
AAAACATTAA AAGAATTCAT CCCGGTTCAG GGCGTTTATG CAGCAGGTCG TCTTGACCGC
GATAGCGAAG GGTTACTGGT GCTGACCAAT AACGGCGCGT TGCAGGCGCG TTTAACCCAG
CCGGGTAAAC GCACCGGAAA AATCTATTAT GTGCAGGTGG AAGGTTTTCC CACGCAAGAC
GCAATTGAAG CCTTGCGCAA TGGCGTAACC TTAAATGATG GCCCTACCCT GCCCGCAGGC
GCGGAGCTGG TTGACGAACC CGCGTGGTTA TGGCCGCGGA ATCCACCAAT TCGTGAACGC
AAAAGTATTC CCACCAGCTG GCTGAAGATC ACCTTATATG AAGGACGTAA TCGCCAGGTG
CGCCGCATGA CCGCCCATGT TGGCTTCCCC ACGCTGCGAC TGATTCGTTA TGCGATGGGT
GATTACACTT TGGATAACCT TGCCAATGGC GAATGGCGAG AAGCA
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| Protein sequence | MRQFIISENT MQKTSFRNHQ VKRFSSQRST RRKPENQPTR VILFNKPYDV LPQFTDEAGR
KTLKEFIPVQ GVYAAGRLDR DSEGLLVLTN NGALQARLTQ PGKRTGKIYY VQVEGFPTQD
AIEALRNGVT LNDGPTLPAG AELVDEPAWL WPRNPPIRER KSIPTSWLKI TLYEGRNRQV
RRMTAHVGFP TLRLIRYAMG DYTLDNLANG EWREA
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