| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_01110 |
|---|
| Symbol | ycfN |
|---|
| ID | 8116013 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012892 |
|---|
| Strand | + |
|---|
| Start bp | 1165236 |
|---|
| End bp | 1166060 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644847367 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002998940 |
|---|
| Protein GI | 251784636 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0510] Predicted choline kinase involved in LPS biosynthesis |
|---|
| TIGRFAM ID | [TIGR02721] thiamine kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.771897 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCGTTTC GCAGCAATAA TCCCATCACG CGCGACGAAT TGCTGTCGCG CTTTTTCCCG
CAGTTTCATC ACGTCACGAC GTTTAATAGT GGGCTTAGTG GCGGGAGTTT TCTCATTGAA
CACCAGGGCC AGCGTTTTGT TGTGCGTCAG CCGCACGATC CTGATGCGCC GCAGTCCGCG
TTCTTGCGCC AGTATCGGGC TTTATCACAA CTACCCGCAT GCATTGCACC GAAGCCGCAT
TTATATCTCC GTGACTGGAT GGTAGTCGAC TATCTGCCCG GCGCGGTAAA AACGTATTTG
CCGGATACCA ACGAACTGGC AGGCTTGCTG TATTATCTAC ATCAACAACC ACGTTTTGGC
TGGCGAATAA CGCTGTTGCC GTTACTGGAA CTGTACTGGC AGCAAAGCGA TCCGGCGCGG
CGGACAGTGG GTTGGCTGCG AATGTTAAAA CGTCTGCGCA AAGCGCGGGA ACCACGGCCT
TTACGCTTAA GTCCATTGCA TATGGATGTC CACGCCGGAA ATTTAGTGCA TAGCGCGTCA
GGGTTAAAAC TCATCGACTG GGAGTATGCA GGAGATGGTG ATATCGCGCT GGAACTGGCG
GCGGTGTGGG TGGAAAATAC TGAACAGCAC CTGCAATTGG TCAATGACTA TGCCACTCGC
GCGAAGATTT ATCCGGCGCA ATTATGGCGT CAGGTCAGGC GATGGTTTCC CTGGCTGCTG
ATGCTCAAAG CAGGGTGGTT TGAGTACCGC TGGCGACAAA CCGGCGATCA ACAATTTATC
AGGCTGGCCG ATGACACCTG GCGGCAGCTA TTAATAAAAC AATAA
|
|---|
| Protein sequence | MPFRSNNPIT RDELLSRFFP QFHHVTTFNS GLSGGSFLIE HQGQRFVVRQ PHDPDAPQSA
FLRQYRALSQ LPACIAPKPH LYLRDWMVVD YLPGAVKTYL PDTNELAGLL YYLHQQPRFG
WRITLLPLLE LYWQQSDPAR RTVGWLRMLK RLRKAREPRP LRLSPLHMDV HAGNLVHSAS
GLKLIDWEYA GDGDIALELA AVWVENTEQH LQLVNDYATR AKIYPAQLWR QVRRWFPWLL
MLKAGWFEYR WRQTGDQQFI RLADDTWRQL LIKQ
|
|---|
| |