| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_01069 |
|---|
| Symbol | mdtH |
|---|
| ID | 8115693 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012892 |
|---|
| Strand | - |
|---|
| Start bp | 1126097 |
|---|
| End bp | 1127305 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644847327 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002998900 |
|---|
| Protein GI | 251784596 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCGCG TGTCGCAGGC GAGGAACCTG GGTAAATATT TCCTGCTCAT CGATAATATG
CTGGTCGTGC TGGGGTTCTT TGTTGTCTTC CCGCTGATCT CTATCCGCTT CGTTGATCAA
ATGGGCTGGG CCGCCGTCAT GGTCGGTATT GCTCTCGGTC TACGCCAATT TATTCAGCAA
GGTCTGGGTA TTTTCGGCGG CGCAATTGCC GACCGCTTTG GTGCCAAACC GATGATTGTT
ACCGGTATGC TGATGCGTGC CGCCGGATTC GCCACAATGG GTATCGCCCA CGAACCGTGG
CTATTGTGGT TTTCATGCCT GCTTTCGGGA CTCGGCGGCA CGTTGTTTGA TCCGCCGCGT
TCGGCGCTGG TGGTGAAACT AATCCGTCCA CAACAACGTG GTCGTTTTTT CTCGCTGTTG
ATGATGCAGG ACAGTGCCGG TGCGGTCATT GGCGCATTGT TGGGGAGCTG GCTGTTGCAA
TACGACTTTC GCCTGGTCTG CGCCACAGGG GCCGTTTTGT TTGTACTGTG TGCAGCGTTC
AATGCGTGGT TATTACCGGC ATGGAAACTC TCCACCGTAC GCACGCCCGT TCGCGAAGGC
ATGACCCGCG TGATGCGCGA CAAGCGTTTT GTCACCTATG TCCTGACGCT GGCGGGTTAC
TACATGCTGG CTGTTCAAGT GATGCTGATG CTGCCAATTA TGGTCAACGA CGTGGCGGGC
GCGCCCTCTG CCGTTAAATG GATGTATGCC ATTGAAGCGT GTCTGTCGTT AACGTTGCTC
TATCCTATCG CCCGCTGGAG TGAAAAGCAT TTTCGTCTGG AACACCGGTT GATGGCTGGG
CTGTTGATAA TGTCATTAAG CATGATGCCG GTGGGCATGG TCAGCGGCCT GCAACAACTT
TTCACCCTGA TTTGTCTGTT TTATATCGGG TCGATCATTG CCGAGCCTGC GCGTGAAACC
TTAAGTGCTT CGCTGGCGGA CGCAAGAGCT CGCGGCAGCT ATATGGGGTT TAGCCGTCTG
GGTCTGGCGA TTGGTGGCGC TATTGGTTAT ATCGGTGGCG GCTGGCTGTT TGACCTGGGC
AAATCGGCGC ACCAGCCAGA GCTTCCGTGG ATGATGCTGG GAATTATTGG CATCTTCACT
TTCCTTGCGC TGGGTTGGCA GTTTAGTCAA AAACGCGCCG CGCGTCGTTT GCTGGAACGC
GACGCCTGA
|
|---|
| Protein sequence | MSRVSQARNL GKYFLLIDNM LVVLGFFVVF PLISIRFVDQ MGWAAVMVGI ALGLRQFIQQ
GLGIFGGAIA DRFGAKPMIV TGMLMRAAGF ATMGIAHEPW LLWFSCLLSG LGGTLFDPPR
SALVVKLIRP QQRGRFFSLL MMQDSAGAVI GALLGSWLLQ YDFRLVCATG AVLFVLCAAF
NAWLLPAWKL STVRTPVREG MTRVMRDKRF VTYVLTLAGY YMLAVQVMLM LPIMVNDVAG
APSAVKWMYA IEACLSLTLL YPIARWSEKH FRLEHRLMAG LLIMSLSMMP VGMVSGLQQL
FTLICLFYIG SIIAEPARET LSASLADARA RGSYMGFSRL GLAIGGAIGY IGGGWLFDLG
KSAHQPELPW MMLGIIGIFT FLALGWQFSQ KRAARRLLER DA
|
|---|
| |