Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | B21_01050 |
Symbol | ymdC |
ID | 8116466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21 |
Kingdom | Bacteria |
Replicon accession | NC_012892 |
Strand | + |
Start bp | 1108330 |
End bp | 1109751 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644847310 |
Product | hypothetical protein |
Protein accession | YP_002998883 |
Protein GI | 251784579 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.795141 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCCCGGC TGGCGAGCGC GGTGCTGCCA CTGTGTTCGC AACATCCCGG TCAGTGTGGC CTTTTTCCTC TGGAGAAAAG TCTGGATGCG TTTGCCGCCC GGTATCGTCT GGCCGAAATG GCAGAGCATA CGCTCGATGT TCAGTATTAC ATCTGGCAGG ACGATATGTC GGGTCGGTTA CTGTTTTCCG CCCTGTTAGC CGCAGCAAAG CGTGGCGTTC GCGTCCGTTT GTTGCTGGAC GACAACAATA CGCCCGGACT TGACGACATT TTACGCTTGC TTGACAGTCA TCCACGCATT GAAGTCCGGC TTTTTAATCC TTTCTCGTTT CGCTTGCTGC GTCCGCTTGG TTATATCACC GACTTTTCCC GTCTTAATCG CCGTATGCAC AATAAAAGTT TCACTGTCGA TGGCGTGGTG ACCCTGGTGG GAGGACGAAA TATTGGTGAT GCCTATTTTG GAGCAGGGGA GGAGCCACTT TTTTCGGATT TAGATGTCAT GGCAATAGGA CCCGTGGTAG AGGACGTTGC CGATGATTTC GCCCGCTACT GGTATTGCAA ATCGGTTTCA CCCTTACAGC AGGTGCTGGA TGTCCCGGAG GGTGAAATGG CGGATCGCAT CGAGTTACCC GCCTCCTGGC ATAACGATGC CATGACGCAT CGTTATTTAC GCAAAATGGA ATCCAGTCCA TTTATAAATC ATCTGGTTGA TGGAACATTG CCGCTTATCT GGGCGAAGAC ACGTTTATTA AGTGATGATC CGGCGAAAGG GGAGGGCAAG GCAAAACGGC ATTCACTGTT ACCGCAGCGC CTGTTCGATA TCATGGGCTC ACCCAGTGAA CGCATCGATA TTATCTCTTC CTATTTTGTA CCGACACGCG CAGGTGTGGC GCAACTCTTA CGGATGGTGA GAAAAGGGGT AAAGATTGCG ATCCTAACCA ATTCTCTTGC CGCTAACGAT GTTGCTGTCG TCCATGCCGG ATACGCGCGC TGGCGCAAAA AATTGCTCCG CTATGGCGTG GAATTATATG AACTCAAGCC GACGCGTGAA CAAAGTAGTA CGTTACACGA TCGCGGCATA ACCGGTAATT CCGGAGCCAG CCTGCATGCT AAAACCTTTA GCATCGATGG TAAAACGGTG TTTATCGGCT CTTTCAATTT CGATCCGCGT TCAACATTGC TCAATACTGA AATGGGCTTC GTGATAGAGA GCGAAACGCT GGCACAGTTA ATTGATAAAC GCTTTATTCA GAGCCAGTAT GATGCGGCCT GGCAGCTCCG TCTGGACAGG TGGGGACGGA TCAACTGGGT TGATCGTCAT GCAAAGAAAG AGATTATTCT CAAAAAAGAA CCCGCCACCA GTTTCTGGAA GCGGGTTATG GTCAGACTGG CGTCGATATT GCCCGTGGAA TGGTTATTGT AA
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Protein sequence | MPRLASAVLP LCSQHPGQCG LFPLEKSLDA FAARYRLAEM AEHTLDVQYY IWQDDMSGRL LFSALLAAAK RGVRVRLLLD DNNTPGLDDI LRLLDSHPRI EVRLFNPFSF RLLRPLGYIT DFSRLNRRMH NKSFTVDGVV TLVGGRNIGD AYFGAGEEPL FSDLDVMAIG PVVEDVADDF ARYWYCKSVS PLQQVLDVPE GEMADRIELP ASWHNDAMTH RYLRKMESSP FINHLVDGTL PLIWAKTRLL SDDPAKGEGK AKRHSLLPQR LFDIMGSPSE RIDIISSYFV PTRAGVAQLL RMVRKGVKIA ILTNSLAAND VAVVHAGYAR WRKKLLRYGV ELYELKPTRE QSSTLHDRGI TGNSGASLHA KTFSIDGKTV FIGSFNFDPR STLLNTEMGF VIESETLAQL IDKRFIQSQY DAAWQLRLDR WGRINWVDRH AKKEIILKKE PATSFWKRVM VRLASILPVE WLL
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