Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | B21_00955 |
Symbol | ycbF |
ID | 8116202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21 |
Kingdom | Bacteria |
Replicon accession | NC_012892 |
Strand | + |
Start bp | 1008446 |
End bp | 1009156 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644847217 |
Product | hypothetical protein |
Protein accession | YP_002998790 |
Protein GI | 251784486 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00537151 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAATA CGTGGAACAG ATTGGCGCTC TTGATTTTCG CCGTTTTATC GCTGCTGGTG GCGGGTGAAT TGCAGGCAGG AGTGGTGGTC GGCGGAACGC GATTTATCTT TCCGGCAGAC AGAGAATCGA TATCTATTTT ACTGACTAAT ACCAGTCAGG AATCCTGGCT TATTAACAGT AAAATCAACC GCCCAACGCG TTGGGCCGGG GGGGAAGCGT CGACAGTGCC AGCACCATTA CTGGCCGCTC CGCCACTTAT TCTCCTGAAG CCCGGTACGA CAGGCACGTT GCGCTTGCTG AGAACGGAAA GCGACATCTT GCCTGTGGAT CGCGAAACGC TATTTGAGTT AAGCATTGCC AGCGTGCCAT CCGGCAAAGT TGAAAATCAG AGCGTAAAAG TGGCGATGCG CTCGGTATTT AAACTGTTCT GGCGACCCGA AGGTTTGCCG GGCGACCCGC TGGAAGCTTA TCAACAATTA CGCTGGACAC GGAATTCGCA GGGTGTACAA CTCACTAACC CAACGCCTTA TTACATTAAC CTGATTCAGG TGAGTGTAAA TGGTAAAGCG TTAAGTAATG TGGGAGTTGT GCCGCCTAAA AGCCAGCGTC AGACAAGCTG GTGTCAGGCA ATCGCACCGT GTCATGTCGC CTGGCGGGCG ATAAATGATT ACGGCGGGTT GAGTGCAAAG AAGGAGCAAA ATCTGCCCTG A
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Protein sequence | MTNTWNRLAL LIFAVLSLLV AGELQAGVVV GGTRFIFPAD RESISILLTN TSQESWLINS KINRPTRWAG GEASTVPAPL LAAPPLILLK PGTTGTLRLL RTESDILPVD RETLFELSIA SVPSGKVENQ SVKVAMRSVF KLFWRPEGLP GDPLEAYQQL RWTRNSQGVQ LTNPTPYYIN LIQVSVNGKA LSNVGVVPPK SQRQTSWCQA IAPCHVAWRA INDYGGLSAK KEQNLP
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