Gene B21_00672 details

Gene Information

• Locus tag: B21_00672
• Symbol: sdhA
• ID: 8116725
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli BL21
• Kingdom: Bacteria
• Replicon accession: NC_012892
• Strand: +
• Start bp: 713886
• End bp: 715652
• Gene Length: 1767 bp
• Protein Length: 588 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 644846943
• Product: hypothetical protein
• Protein accession: YP_002998516
• Protein GI: 251784212
• COG category: [C] Energy production and conversion
• COG ID: [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
• TIGRFAM ID: [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup; [TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATTGC CAGTCAGAGA ATTTGATGCA GTTGTGATTG GTGCCGGCGG CGCAGGTATG 
CGCGCGGCGC TGCAAATTTC CCAGAGCGGC CAGACCTGTG CGCTGCTCTC TAAAGTCTTC 
CCGACCCGTT CCCATACCGT TTCTGCGCAA GGCGGCATTA CCGTTGCGCT GGGTAATACC 
CATGAAGATA ACTGGGAATG GCATATGTAC GACACCGTAA AAGGGTCGGA CTATATCGGT 
GACCAGGACG CGATTGAATA TATGTGTAAA ACCGGGCCGG AAGCGATTCT GGAACTCGAA 
CACATGGGCC TGCCGTTCTC GCGTCTTGAT GATGGTCGTA TCTATCAACG TCCGTTTGGC 
GGTCAGTCGA AAAACTTCGG CGGCGAGCAG GCGGCACGCA CTGCGGCAGC GGCTGACCGT 
ACCGGTCACG CACTGTTGCA CACGCTTTAT CAGCAGAACC TGAAAAACCA CACCACCATT 
TTCTCCGAGT GGTATGCGCT GGATCTGGTG AAAAACCAGG ATGGCGCGGT GGTGGGTTGT 
ACCGCACTGT GCATCGAAAC CGGTGAAGTG GTTTATTTCA AAGCCCGCGC TACCGTGCTG 
GCGACTGGCG GGGCAGGGCG TATTTATCAG TCCACCACTA ACGCCCACAT TAACACTGGC 
GACGGTGTCG GCATGGCTAT CCGCGCAGGC GTACCGGTGC AGGATATGGA AATGTGGCAA 
TTCCACCCGA CCGGCATTGC CGGTGCGGGC GTACTGGTCA CCGAAGGTTG CCGTGGTGAA 
GGCGGTTATC TGCTGAACAA ACATGGCGAA CGCTTTATGG AGCGTTATGC GCCGAACGCC 
AAAGACCTGG CGGGCCGTGA TGTGGTGGCG CGTTCCATCA TGATTGAAAT CCGTGAAGGT 
CGCGGCTGTG ATGGTCCGTG GGGGCCACAC GCGAAACTGA AACTCGATCA CCTGGGTAAA 
GAAGTTCTCG AATCCCGTCT GCCGGGTATC CTGGAGCTTT CCCGTACCTT CGCTCACGTT 
GATCCGGTGA AAGAGCCGAT TCCGGTTATC CCAACCTGTC ACTACATGAT GGGCGGTATT 
CCGACCAAAG TGACCGGTCA GGCGCTGACT GTGAATGAGA AAGGCGAAGA TGTGGTTGTT 
CCGGGGCTGT TCGCGGTAGG TGAAATTGCC TGCGTATCGG TACACGGTGC TAACCGTCTG 
GGCGGTAACT CGCTGCTGGA CCTGGTGGTC TTTGGTCGCG CAGCGGGTCT GCATCTGCAA 
GAGTCTATCG CCGAGCAGGG CGCATTGCGC GATGCCAGCG AGTCTGATGT TGAAGCATCT 
CTGGATCGTC TGAACCGCTG GAACAATAAT CGTAACGGTG AAGATCCGGT GGCGATTCGT 
AAAGCGCTGC AAGAATGTAT GCAGCATAAC TTCTCGGTCT TCCGTGAAGG TGATGCGATG 
GCGAAAGGGC TTGAGCAGTT GAAAGTTATC CGCGAGCGTC TGAAAAATGC CCGTCTGGAT 
GACACTTCCA GCGAGTTCAA CACCCAGCGC GTTGAGTGTC TGGAACTGGA TAACCTGATG 
GAAACGGCGT ATGCAACGGC TGTTTCTGCC AACTTCCGTA CCGAAAGCCG TGGCGCGCAT 
AGCCGCTTCG ACTTCCCGGA TCGTGATGAT GAAAACTGGC TGTGCCACTC CCTGTATCTG 
CCAGAGTCGG AATCCATGAC GCGCCGAAGC GTCAACATGG AACCGAAACT GCGCCCGGCA 
TTCCCGCCGA AGATTCGTAC TTACTAA 

 

Protein sequence

MKLPVREFDA VVIGAGGAGM RAALQISQSG QTCALLSKVF PTRSHTVSAQ GGITVALGNT 
HEDNWEWHMY DTVKGSDYIG DQDAIEYMCK TGPEAILELE HMGLPFSRLD DGRIYQRPFG 
GQSKNFGGEQ AARTAAAADR TGHALLHTLY QQNLKNHTTI FSEWYALDLV KNQDGAVVGC 
TALCIETGEV VYFKARATVL ATGGAGRIYQ STTNAHINTG DGVGMAIRAG VPVQDMEMWQ 
FHPTGIAGAG VLVTEGCRGE GGYLLNKHGE RFMERYAPNA KDLAGRDVVA RSIMIEIREG 
RGCDGPWGPH AKLKLDHLGK EVLESRLPGI LELSRTFAHV DPVKEPIPVI PTCHYMMGGI 
PTKVTGQALT VNEKGEDVVV PGLFAVGEIA CVSVHGANRL GGNSLLDLVV FGRAAGLHLQ 
ESIAEQGALR DASESDVEAS LDRLNRWNNN RNGEDPVAIR KALQECMQHN FSVFREGDAM 
AKGLEQLKVI RERLKNARLD DTSSEFNTQR VECLELDNLM ETAYATAVSA NFRTESRGAH 
SRFDFPDRDD ENWLCHSLYL PESESMTRRS VNMEPKLRPA FPPKIRTY