| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_00643 |
|---|
| Symbol | kdpD |
|---|
| ID | 8115933 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012892 |
|---|
| Strand | - |
|---|
| Start bp | 681012 |
|---|
| End bp | 683696 |
|---|
| Gene Length | 2685 bp |
|---|
| Protein Length | 894 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644846916 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002998489 |
|---|
| Protein GI | 251784185 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAACG AACCCTTACG TCCCGACCCC GATCGTCTGC TGGAACAAAC TGCCGCGCCG
CATCGGGGGA AGCTGAAAGT TTTCTTCGGT GCCTGTGCAG GCGTCGGGAA GACCTGGGCG
ATGCTGGCAG AAGCCCAGCG ACTGCGGGCG CAAGGGCTGG ATATTGTGGT TGGCGTGGTA
GAAACCCATG GGCGGAAAGA TACCGCCGCC ATGCTTGAAG GGCTGGCTGT TCTGCCGCCC
AAACGCCAGG CGTACCGTGG GCGGCATATC AGCGAGTTTG ATCTCGATGC CGCCCTCGCC
CGCCGTCCGG CGCTGATCTT AATGGACGAA CTGGCGCACA GTAATGCGCC AGGTTCTCGT
CATCCTAAAC GCTGGCAGGA TATCGAAGAA CTGCTGGAAG CTGGCATTGA TGTTTTCACA
ACCGTCAACG TTCAGCATCT GGAAAGTCTG AATGATGTGG TCAGCGGCGT CACCGGAATT
CAGGTACGGG AAACCGTGCC CGATCCTTTT TTCGATGCCG CCGACGACGT AGTGCTGGTG
GACTTGCCCC CGGACGATCT GCGCCAGCGG CTGAAAGAAG GCAAAGTCTA TATTGCCGGG
CAGGCGGAGC GCGCCATTGA ACATTTTTTC CGCAAAGGCA ATCTGATCGC CCTGCGTGAA
CTGGCACTGC GCCGTACTGC CGATCGCGTA GATGAGCAAA TGCGCGCCTG GCGGGGGCAT
CCTGGTGAAG AGAAAGTGTG GCACACGCGC GACGCGATCC TTTTATGTAT CGGGCATAAC
ACCGGCAGTG AGAAACTGGT CCGCGCGGCG GCGCGGTTGG CCTCGCGCCT GGGTAGCGTC
TGGCACGCGG TGTATGTTGA AACCCCTGCC CTGCATCGCT TACCGGAAAA AAAACGTCGG
GCAATTCTCA GCGCCTTACG TCTGGCGCAG GAACTGGGCG CGGAGACGGC AACACTTTCT
GATCCAGCAG AAGAGAAAGC GGTAGTGCGT TATGCCCGTG AACATAATCT CGGCAAGATT
ATTCTCGGTC GCCCAGCCTC GCGCCGCTGG TGGCGTCGGG AAACGTTTGC TGACCGACTG
GCGCGCATCG CCCCCGATCT CGATCAGGTG CTGGTCGCGC TTGATGAACC ACCCGCCCGC
ACGATTAACA ACGCGCCGGA TAGCCGCTCT TTTAAAGACA AGTGGCGGGT ACAGATTCAG
GGATGCGTGG TTGCCGCCGC GTTATGCGCC GTTATCACCT TAATTGCCAT GCAGTGGCTG
ATGGCGTTTG ATGCCGCCAA CCTGGTGATG CTGTATCTGC TTGGCGTGGT GGTAGTGGCG
CTATTTTATG GACGCTGGCC TTCGGTGGTT GCTACCGTCA TTAATGTGGT GAGTTTCGAT
CTCTTTTTTA TCGCCCCACG CGGCACGCTC GCCGTCTCTG ATGTGCAATA TCTGCTGACC
TTCGCGGTGA TGTTAACCGT CGGGCTGGTG ATCGGGAACC TTACTGCTGG CGTGCGTTAT
CAGGCGCGGG TAGCCCGCTA CCGCGAGCAA CGCACACGGC ACTTATATGA AATGTCGAAA
GCTCTGGCGG TGGGCCGCAG TCCGCAGGAC ATCGCCGCCA CCAGCGAACA ATTTATTGCC
TCCACGTTTC ATGCCCGCAG TCAGGTGTTG TTGCCCGATG ACAACGGTAA ATTGCAGCCG
TTAACACATC CGCAAGGAAT GACGCCATGG GACGATGCCA TCGCGCAGTG GAGTTTTGAT
AAAGGCCTGC CTGCGGGTGC GGGCACCGAC ACGTTACCCG GCGTGCCGTA CCAGATTTTG
CCGCTAAAAA GCGGCGAGAA AACCTACGGA CTGGTGGTGG TGGAACCGGG GAATCTGCGC
CAGTTGATGA TCCCGGAGCA GCAGCGCCTG CTGGAGACAT TTACGCTGTT AGTCGCCAAT
GCCCTTGAGC GGCTGACACT GACCGCCAGC GAAGAACAGG CGCGGATGGC AAGCGAACGT
GAACAGATCC GCAACGCCCT GCTGGCGGCG CTTTCGCATG ATTTACGCAC GCCGCTTACG
GTGCTGTTTG GTCAGGCAGA AATCTTAACG CTCGATCTGG CAAGCGAAGG ATCGCCCCAC
GCCCGCCAGG CCAGCGAGAT TCGTCAGCAT GTGCTGAACA CTACCCGACT GGTGAATAAT
CTACTGGATA TGGCGCGAAT TCAGTCCGGC GGCTTTAATT TGAAGAAAGA GTGGTTAACG
CTGGAAGAAG TAGTCGGCAG CGCGCTGCAA ATGCTGGAAC CGGGTTTATC GTCGCCCATC
AATCTTTCTC TGCCAGAACC GCTGACCTTA ATCCACGTTG ACGGGCCACT CTTTGAACGG
GTGCTGATTA ATCTGCTGGA GAACGCGGTG AAATATGCGG GTGCGCAGGC CGAAATTGGT
ATCGATGCCC ACGTTGAGGG CGAAAATCTA CAACTGGATG TCTGGGATAA CGGCCCCGGT
CTTCCGCCAG GCCAGGAGCA GACGATATTT GATAAGTTTG CTCGCGGGAA TAAAGAGTCG
GCAGTACCGG GGGTAGGGCT TGGACTGGCA ATTTGTCGGG CGATAGTGGA TGTACACGGG
GGCACTATTA CCGCGTTCAA CCGACCGGAA GGTGGTGCCT GTTTTCGTGT TACACTTCCC
CAGCAAACTG CCCCTGAACT TGAAGAATTT CATGAGGATA TGTGA
|
|---|
| Protein sequence | MNNEPLRPDP DRLLEQTAAP HRGKLKVFFG ACAGVGKTWA MLAEAQRLRA QGLDIVVGVV
ETHGRKDTAA MLEGLAVLPP KRQAYRGRHI SEFDLDAALA RRPALILMDE LAHSNAPGSR
HPKRWQDIEE LLEAGIDVFT TVNVQHLESL NDVVSGVTGI QVRETVPDPF FDAADDVVLV
DLPPDDLRQR LKEGKVYIAG QAERAIEHFF RKGNLIALRE LALRRTADRV DEQMRAWRGH
PGEEKVWHTR DAILLCIGHN TGSEKLVRAA ARLASRLGSV WHAVYVETPA LHRLPEKKRR
AILSALRLAQ ELGAETATLS DPAEEKAVVR YAREHNLGKI ILGRPASRRW WRRETFADRL
ARIAPDLDQV LVALDEPPAR TINNAPDSRS FKDKWRVQIQ GCVVAAALCA VITLIAMQWL
MAFDAANLVM LYLLGVVVVA LFYGRWPSVV ATVINVVSFD LFFIAPRGTL AVSDVQYLLT
FAVMLTVGLV IGNLTAGVRY QARVARYREQ RTRHLYEMSK ALAVGRSPQD IAATSEQFIA
STFHARSQVL LPDDNGKLQP LTHPQGMTPW DDAIAQWSFD KGLPAGAGTD TLPGVPYQIL
PLKSGEKTYG LVVVEPGNLR QLMIPEQQRL LETFTLLVAN ALERLTLTAS EEQARMASER
EQIRNALLAA LSHDLRTPLT VLFGQAEILT LDLASEGSPH ARQASEIRQH VLNTTRLVNN
LLDMARIQSG GFNLKKEWLT LEEVVGSALQ MLEPGLSSPI NLSLPEPLTL IHVDGPLFER
VLINLLENAV KYAGAQAEIG IDAHVEGENL QLDVWDNGPG LPPGQEQTIF DKFARGNKES
AVPGVGLGLA ICRAIVDVHG GTITAFNRPE GGACFRVTLP QQTAPELEEF HEDM
|
|---|
| |