| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_00572 |
|---|
| Symbol | citF |
|---|
| ID | 8116086 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012892 |
|---|
| Strand | - |
|---|
| Start bp | 607670 |
|---|
| End bp | 609202 |
|---|
| Gene Length | 1533 bp |
|---|
| Protein Length | 510 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644846849 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002998422 |
|---|
| Protein GI | 251784118 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3051] Citrate lyase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR01584] citrate lyase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAGA AAATTGAACA ATCTCAACGA CAAGAACGGG TAGCGGCCTG GAATCGTCGC
GCTGAATGCG ATCTTGCCGC TTTCCAGAAC TCGCCAAAGC AAACCTACCA GGCTGAAAAA
GCGCGCGATC GCAAACTGTG CGCCAACCTG GAAGAAGCGA TTCGTCGCTC TGGTTTACAG
GACGGCATGA CGGTTTCCTT CCATCACGCT TTCCGTGGCG GTGACCTGAC CGTCAATATG
GTGATGGACG TCATCGCGAA GATGGGCTTT AAAAACCTGA CCCTGGCGTC CAGCTCCCTG
AGTGATTGCC ATGCGCCGCT GGTAGAACAC ATTCGCCAGG GCGTGGTTAC CCGCATTTAT
ACCTCCGGCC TGCGTGGTCC ACTGGCGGAA GAGATCTCCC GTGGTCTGCT GGCGGAACCG
GTGCAGATCC ACTCTCACGG CGGACGTGTG CATCTGGTAC AGAGCGGCGA ACTGAATATC
GACGTGGCTT TCCTCGGCGT CCCGTCCTGT GATGAATTCG GTAATGCCAA CGGCTACACC
GGTAAAGCCT GCTGCGGCTC CCTCGGCTAT GCAATGGTTG ATGCCGACAA CGCAAAACAG
GTTGTGATGC TTACCGAAGA ACTGCTGCCT TATCCGCATA ATCCGGCAAG CATTGAGCAA
GATCAGGTTG ATTTGATCGT CAAAGTTGAC CGCGTTGGCG ATGCTGCAAA AATCGGCGCT
GGCGCGACCC GTATGACCAC TAACCCGCGC GAACTGCTTA TTGCCCGTAG CGCTGCGGAT
GTGATTGTCA ACTCTGGCTA CTTCAAAGAA GGTTTCTCCA TGCAAACCGG CACCGGCGGC
GCATCGCTGG CGGTAACCCG TTTCCTGGAA GACAAAATGC GTAGCCGCGA TATTCGCGCC
GACTTCGCCC TTGGCGGTAT TACCGCGACG ATGGTTGACC TGCACGAAAA AGGTCTGATC
CGCAAACTGC TGGATGTGCA GAGCTTTGAC AGCCATGCTG CGCAATCGCT GGCCCGTAAC
CCCAATCACA TCGAAATCAG CGCCAATCAG TACGCTAACT GGGGTTCGAA AGGCGCATCG
GTTGATCGTC TCGACGTGGT GGTACTGAGC GCGCTGGAAA TTGACACCCA GTTCAACGTT
AACGTGCTGA CCGGCTCTGA CGGCGTACTG CGTGGTGCTT CCGGTGGTCA CTGCGATACC
GCGATTGCCT CTGCGCTTTC CATCATCGTC GCGCCGCTGG TACGCGGTCG TATTCCGACT
CTGGTGGATA ACGTACTGAC CTGCATCACC CCAGGCTCCA GTGTCGATAT TCTGGTCACA
GACCACGGTA TCGCAGTTAA CCCGGCACGT CCGGAACTGG CAGAACGTCT GCAGGAAGCG
GGCATTAAAG TGGTTTCCAT TGAGTGGCTG CGCGAACGTG CGCGTCTGCT GACCGGTGAA
CCACAGCCGA TTGAATTCAC AGACCGCGTC GTTGCCGTTG TGCGTTACCG CGATGGCTCG
GTGATCGATG TTGTGCATCA GGTGAAGGAA TAA
|
|---|
| Protein sequence | MTQKIEQSQR QERVAAWNRR AECDLAAFQN SPKQTYQAEK ARDRKLCANL EEAIRRSGLQ
DGMTVSFHHA FRGGDLTVNM VMDVIAKMGF KNLTLASSSL SDCHAPLVEH IRQGVVTRIY
TSGLRGPLAE EISRGLLAEP VQIHSHGGRV HLVQSGELNI DVAFLGVPSC DEFGNANGYT
GKACCGSLGY AMVDADNAKQ VVMLTEELLP YPHNPASIEQ DQVDLIVKVD RVGDAAKIGA
GATRMTTNPR ELLIARSAAD VIVNSGYFKE GFSMQTGTGG ASLAVTRFLE DKMRSRDIRA
DFALGGITAT MVDLHEKGLI RKLLDVQSFD SHAAQSLARN PNHIEISANQ YANWGSKGAS
VDRLDVVVLS ALEIDTQFNV NVLTGSDGVL RGASGGHCDT AIASALSIIV APLVRGRIPT
LVDNVLTCIT PGSSVDILVT DHGIAVNPAR PELAERLQEA GIKVVSIEWL RERARLLTGE
PQPIEFTDRV VAVVRYRDGS VIDVVHQVKE
|
|---|
| |