| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_00489 |
|---|
| Symbol | sfmF |
|---|
| ID | 8116748 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012892 |
|---|
| Strand | + |
|---|
| Start bp | 532222 |
|---|
| End bp | 532737 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 644846771 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002998344 |
|---|
| Protein GI | 251784040 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAGAG TACTCTTTAG CTGTTTCTGC GGGTTACTGT GGAGTTCCAG TGGATGGGCA
GCTGACCCTT TAGGAACGAT TAATATCAAT TTGCACGGTA ACGTTGTTGA TTTCTCCTGT
ACCGTAAACA CAGCGGATAT TGATAAGACG GTAGATTTAG GCAGATGGCC TACGACACAA
TTACTGAACG CTGGCGATAC CACGGCACTC GTCCCTTTTA GCCTGCGGCT GGAGGGATGT
CCTCCGGGTT CAGTTGCGAT TTTATTTACG GGAACGCCGG CATCCGATAC CAACCTGCTG
GCTCTGGATG ATCCCGCAAT GGCACAAACC GTCGCCATCG AATTACGTAA TAGCGATCGC
TCCCGGCTCG CACTGGGGGA GGCGAGCCCG ACTGAGGAAG TAGATGCAAA TGGCAATGTC
ACACTAAACT TTTTTGCCAA TTATCGAGCG TTAGCCAGCG GTGTTCGGCC AGGTGTGGCG
AAAGCGGATG CGATATTTAT GATCAATTAC AATTAA
|
|---|
| Protein sequence | MRRVLFSCFC GLLWSSSGWA ADPLGTININ LHGNVVDFSC TVNTADIDKT VDLGRWPTTQ
LLNAGDTTAL VPFSLRLEGC PPGSVAILFT GTPASDTNLL ALDDPAMAQT VAIELRNSDR
SRLALGEASP TEEVDANGNV TLNFFANYRA LASGVRPGVA KADAIFMINY N
|
|---|
| |