| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_00466 |
|---|
| Symbol | ybbW |
|---|
| ID | 8114588 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012892 |
|---|
| Strand | + |
|---|
| Start bp | 506577 |
|---|
| End bp | 508031 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644846748 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002998321 |
|---|
| Protein GI | 251784017 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1953] Cytosine/uracil/thiamine/allantoin permeases |
|---|
| TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.955616 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACATC AGAGAAAACT ATTCCAGCAA CGCGGCTATA GCGAAGATCT ATTGCCGAAA
ACGCAAAGCC AGCGGACCTG GAAAACATTT AACTATTTTA CCTTATGGAT GGGTTCGGTT
CATAACGTTC CCAATTATGT GATGGTCGGC GGCTTTTTTA TTCTCGGCTT GTCTACCTTT
AGTATTATGC TGGCAATTAT CCTCAGCGCC TTTTTCATTG CCGCGGTAAT GGTATTAAAC
GGTGCTGCGG GCAGTAAATA CGGTGTGCCT TTTGCCATGA TCCTGCGTGC TTCTTACGGT
GTACGTGGTG CACTGTTTCC CGGATTATTA AGGGGCGGAA TTGCCGCCAT CATGTGGTTT
GGTTTGCAAT GTTACGCGGG GTCACTGGCC TGCTTGATTC TGATTGGCAA AATCTGGCCG
GGATTTTTAA CTCTCGGTGG TGATTTCACT CTGTTAGGCC TTTCTCTACC GGGCTTAATT
ACTTTCTTAA TCTTCTGGCT GGTCAACGTT GGTATAGGTT TTGGCGGTGG CAAAGTTTTA
AATAAATTCA CTGCCATTCT TAACCCGTGC ATCTATATCG TTTTCGGCGG TATGGCGATT
TGGGCGATTT CACTGGTCGG GATCGGTCCA ATCTTTGACT ACATTCCGAG CGGTATTCAG
AAAGCAGAAA ACGGTGGCTT CCTGTTCCTG GTGGTGATTA ACGCGGTAGT TGCGGTCTGG
GCGGCACCGG CGGTGAGCGC ATCCGACTTT ACGCAAAACG CCCACTCGTT TCGTGAGCAG
GCGCTGGGGC AAACGCTGGG TTTAGTTGTG GCCTATATTC TGTTTGCGGT CGCCGGGGTA
TGTATTATTG CCGGAGCCAG TATTCACTAC GGCGCTGATA CCTGGAACGT GCTGGATATT
GTTCAGCGTT GGGACAGCCT GTTCGCCTCG TTCTTTGCGG TACTGGTTAT TCTGATGACA
ACTATCTCCA CTAACGCGAC CGGTAATATT ATTCCAGCCG GTTATCAGAT TGCCGCCATT
GCACCGACAA AACTGACCTA TAAAAACGGC GTACTGATTG CCAGTATTAT CAGCTTGCTG
ATCTGCCCGT GGAAATTAAT GGAAAATCAG GACAGCATTT ATCTTTTCCT CGATATTATC
GGCGGAATGC TTGGTCCGGT AATTGGTGTC ATGATGGCGC ATTATTTTGT GGTGATGCGC
GGACAAATTA ATCTTGATGA ACTGTATACC GCACCTGGCG ATTATAAATA TTACGATAAC
GGTTTTAACC TCACTGCGTT TTCAGTAACT CTGGTGGCCG TTATTTTATC TCTTGGCGGT
AAGTTTATTC ACTTTATGGA ACCGTTATCG CGTGTTTCAT GGTTTGTCGG CGTCATCGTC
GCCTTTGCGG CCTACGCCTT ATTAAAGAAA CGTACAACAG CAGAAAAAAC AGGAGAGCAA
AAAACCATAG GTTAA
|
|---|
| Protein sequence | MEHQRKLFQQ RGYSEDLLPK TQSQRTWKTF NYFTLWMGSV HNVPNYVMVG GFFILGLSTF
SIMLAIILSA FFIAAVMVLN GAAGSKYGVP FAMILRASYG VRGALFPGLL RGGIAAIMWF
GLQCYAGSLA CLILIGKIWP GFLTLGGDFT LLGLSLPGLI TFLIFWLVNV GIGFGGGKVL
NKFTAILNPC IYIVFGGMAI WAISLVGIGP IFDYIPSGIQ KAENGGFLFL VVINAVVAVW
AAPAVSASDF TQNAHSFREQ ALGQTLGLVV AYILFAVAGV CIIAGASIHY GADTWNVLDI
VQRWDSLFAS FFAVLVILMT TISTNATGNI IPAGYQIAAI APTKLTYKNG VLIASIISLL
ICPWKLMENQ DSIYLFLDII GGMLGPVIGV MMAHYFVVMR GQINLDELYT APGDYKYYDN
GFNLTAFSVT LVAVILSLGG KFIHFMEPLS RVSWFVGVIV AFAAYALLKK RTTAEKTGEQ
KTIG
|
|---|
| |