| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_00235 |
|---|
| Symbol | pepD |
|---|
| ID | 8113448 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012892 |
|---|
| Strand | - |
|---|
| Start bp | 258746 |
|---|
| End bp | 260203 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644846525 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002998098 |
|---|
| Protein GI | 251783794 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2195] Di- and tripeptidases |
|---|
| TIGRFAM ID | [TIGR01893] aminoacyl-histidine dipeptidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCTGAAC TGTCTCAATT ATCTCCACAG CCGCTGTGGG ATATTTTTGC CAAAATCTGT
TCTATTCCTC ACCCGTCCTA TCATGAAGAG CAACTCGCTG AATACATTGT TGGTTGGGCA
AAAGAGAAAG GTTTCCATGT CGAACGCGAT CAGGTAGGTA ATATCCTGAT TCGTAAACCT
GCCACCGCAG GTATGGAAAA TCGTAAACCG GTCGTCTTGC AGGCCCACCT CGATATGGTG
CCGCAGAAAA ATAACGACAC CGTGCATGAC TTCACGAAAG ATCCTATCCA GCCTTATATT
GATGGCGAAT GGGTTAAAGC GCGCGGCACC ACGCTGGGTG CAGATAACGG CATTGGTATG
GCGTCTGCGC TGGCGGTTCT GGCTGACGAA AACGTGGTTC ACGGCCCGCT GGAAGTGCTG
CTGACCATGA CCGAAGAAGC CGGTATGGAC GGTGCGTTCG GCTTACAGAG CAACTGGTTG
CAGGCTGATA TTCTGATTAA CACCGACTCC GAAGAAGAAG GTGAAATCTA CATGGGTTGC
GCGGGGGGTA TCGACTTCAC CTCCAACCTG CATTTGGATC GTGAAGCGGT TCCAGCTGGC
TTTGAAACCT TCAAGTTAAC CTTAAAAGGT CTAAAAGGCG GTCACTCCGG CGGTGAAATC
CACGTTGGCC TGGGTAATGC CAACAAACTG CTGGTGCGCT TCCTGGCGGG TCATGCGGAA
GAGCTGGACC TGCGCCTTAT CGATTTCAAC GGTGGCACAC TGCGTAACGC CATCCCGCGT
GAAGCCTTTG CGACCATTGC TGTCGCAGCT GATAAAGTCG ACGCCCTGAA ATCTCTGGTG
AATACCTATC AGGACATCCT GAAAAACGAG CTGGCAGAGA AAGAGAAGAA TCTGGCCTTG
TTGCTGGACT CTGTAGCGAA CGATAAAGCT GCTCTGATTG CGAAATCTCG CGATACCTTT
ATTCGTCTGC TGAACGCCAC CCCGAACGGT GTGATCCGCA ATTCCGACGT GGCAAAAGGT
GTGGTCGAAA CCTCCCTGAA CGTCGGTGTG GTGACCATGA CTGACAATAA CGTAGAAATT
CACTGCCTGA TCCGTTCACT GATCGACAGC GGTAAAGACT ACGTGGTGAG CATGCTGGAT
TCGCTGGGTA AACTGGCTGG CGCGAAAACC GAAGCGAAAG GCGCATATCC TGGCTGGCAG
CCGGACGCTA ATTCTCCGGT GATGCATCTG GTACGTGAAA CCTATCAGCG CCTGTTCAAC
AAGACGCCGA ACATCCAGAT TATCCACGCG GGCCTGGAAT GTGGTCTGTT TAAAAAACCG
TATCCGGAAA TGGACATGGT TTCTATCGGG CCAACTATCA CCGGTCCACA CTCTCCGGAT
GAGCAAGTTC ACATCAAAAG CGTAGGTCAT TACTGGACAC TGCTGACTGA ACTGCTGAAA
GAAATTCCGG CGAAGTAA
|
|---|
| Protein sequence | MSELSQLSPQ PLWDIFAKIC SIPHPSYHEE QLAEYIVGWA KEKGFHVERD QVGNILIRKP
ATAGMENRKP VVLQAHLDMV PQKNNDTVHD FTKDPIQPYI DGEWVKARGT TLGADNGIGM
ASALAVLADE NVVHGPLEVL LTMTEEAGMD GAFGLQSNWL QADILINTDS EEEGEIYMGC
AGGIDFTSNL HLDREAVPAG FETFKLTLKG LKGGHSGGEI HVGLGNANKL LVRFLAGHAE
ELDLRLIDFN GGTLRNAIPR EAFATIAVAA DKVDALKSLV NTYQDILKNE LAEKEKNLAL
LLDSVANDKA ALIAKSRDTF IRLLNATPNG VIRNSDVAKG VVETSLNVGV VTMTDNNVEI
HCLIRSLIDS GKDYVVSMLD SLGKLAGAKT EAKGAYPGWQ PDANSPVMHL VRETYQRLFN
KTPNIQIIHA GLECGLFKKP YPEMDMVSIG PTITGPHSPD EQVHIKSVGH YWTLLTELLK
EIPAK
|
|---|
| |