Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | B21_00145 |
Symbol | ligT |
ID | 8116749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21 |
Kingdom | Bacteria |
Replicon accession | NC_012892 |
Strand | - |
Start bp | 164354 |
End bp | 164884 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644846438 |
Product | hypothetical protein |
Protein accession | YP_002998011 |
Protein GI | 251783707 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1514] 2'-5' RNA ligase |
TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00128631 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGAAC CGCAACGTCT GTTCTTTGCT ATCGACTTAC CTGCAGAAAT CCGCGAACAG ATTATCCACT GGCGCGCCAA ACACTTCCCA CCTGAGGCGG GACGTCCGGT CGCCGCCGAT AATTTGCATC TGACTCTGGC ATTTTTAGGC GAAGTGAGCG CCGAGAAAGA GAAGGCGCTT TCTCTTTTAG CCGGACGGAT TCGTCAACCT GGTTTCACAC TCACGCTTGA TGACGCCGGA CAATGGCTGC GTTCGCGTGT GGTGTGGTTA GGGATGCGTC AGCCTCCACG CGGCTTAATC CAGCTGGCGA ATATGCTCCG TTCACAGGCT GCCCGCAGCG GTTGTTTTCA AAGCAATCGT CCGTTTCATC CACATATTAC CTTATTGCGC GACGCCAGCG AGGCGGTGAC AATCCCGCCG CCGGGTTTTA ACTGGTCTTA TGCGGTGACG GAGTTCACCC TTTACGCCTC CTCGTTTGCC CGTGGACGCA CACGCTACAC GCCGCTAAAA CGCTGGGCGC TCACGCAATA A
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Protein sequence | MSEPQRLFFA IDLPAEIREQ IIHWRAKHFP PEAGRPVAAD NLHLTLAFLG EVSAEKEKAL SLLAGRIRQP GFTLTLDDAG QWLRSRVVWL GMRQPPRGLI QLANMLRSQA ARSGCFQSNR PFHPHITLLR DASEAVTIPP PGFNWSYAVT EFTLYASSFA RGRTRYTPLK RWALTQ
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