| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_00138 |
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| Symbol | ecpD |
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| ID | 8113197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli BL21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012892 |
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| Strand | - |
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| Start bp | 158307 |
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| End bp | 159047 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644846431 |
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| Product | hypothetical protein |
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| Protein accession | YP_002998004 |
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| Protein GI | 251783700 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0326342 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTTTTA ACACCAAACA TACAACAGCT TTATGCTTCG TAACCTGTAT GGCTTTTAGT
TCATCGTCTA TTGCGGACAT TGTCATTTCG GGTACTCGCG TAATATATAA AAGCGATCAA
AAAAGTGTCA ACGTACGTCT GGAAAATAAA GGGAATAACC CGTTGCTTGT CCAGAGTTGG
TTAGATACTG GCGATGACAA CGCTGAGCCT GGCAGTATTA CAGTCCCTTT TACTGCCACG
CCGCCAGTAT CGCGTATTGA TGCCAAACGT GGGCAAACAA TCAAATTAAT GTACACAGCC
AGCACCTCAC TGCCTAAAGA CAGAGAGAGC GTGTTCTGGT TTAACGTACT GGAAGTTCCA
CCAAAACCAG ATGCAGAAAA GGTCGCGAAT CAAAGTCTGC TGCAACTGGC ATTTCGCACA
CGTATAAAAC TTTTCTATCG CCCGGATGGA TTGAAGGGAA ATCCCTCTGA AGCCCCGTTA
GCCCTGAAGT GGTTCTGGTC AGGTTCAGAA GGTAAGGCGT CATTGCGAGT GACCAATCCA
ACCCCTTACT ACGTCTCTTT TAGCAGTGGT GATTTAGAAG CTAGCGGTAA ACGCTATCCG
ATTGATGTGA AAATGATTGC ACCATTTAGT GATGAGGTCA TGAAAGTCAC TGGCCTTAAT
GGCAAAGCAA GTTCTGCAAA AGTACATTTT TACGCCATTA ATGATTTTGG TGGCGCCATT
GAAGGTAATG CCAGTCTGTA A
|
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| Protein sequence | MFFNTKHTTA LCFVTCMAFS SSSIADIVIS GTRVIYKSDQ KSVNVRLENK GNNPLLVQSW
LDTGDDNAEP GSITVPFTAT PPVSRIDAKR GQTIKLMYTA STSLPKDRES VFWFNVLEVP
PKPDAEKVAN QSLLQLAFRT RIKLFYRPDG LKGNPSEAPL ALKWFWSGSE GKASLRVTNP
TPYYVSFSSG DLEASGKRYP IDVKMIAPFS DEVMKVTGLN GKASSAKVHF YAINDFGGAI
EGNASL
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