| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_00055 |
|---|
| Symbol | pdxA |
|---|
| ID | 8115955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012892 |
|---|
| Strand | - |
|---|
| Start bp | 56623 |
|---|
| End bp | 57612 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644846349 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002997922 |
|---|
| Protein GI | 251783618 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
|---|
| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0423279 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTAAAA CCCAACGTGT TGTGATCACT CCCGGCGAGC CCGCCGGGAT TGGCCCGGAC
TTAGTTGTCC AGCTTGCACA GCGTGAGTGG CCGGTCGAAC TGGTTGTTTG TGCCGATGCC
ACTCTCCTTA CCAACCGGGC AGCGATGCTC GGTTTGCCGC TCACCCTCCG CCCTTATTCC
CCCAACTCCC CTGCACAACC GCAAACTGCG GGCACATTAA CGCTACTTCC TGTCGCGCTA
CGTGCACCTG TCACTGCGGG GCAGTTAGCG GTTGAAAATG GGCATTATGT GGTGGAAACG
CTGGCGCGAG CGTGCGATGG TTGTCTGAAC GGCGAATTTG CCGCGCTGAT CACAGGTCCG
GTGCATAAAG GCGTTATTAA CGACGCTGGC ATTCCTTTTA CCGGTCATAC CGAGTTTTTC
GAAGAGCGTT CGCAGGCGAA AAAGGTGGTG ATGATGCTGG CGACCGAAGA ACTTCGCGTG
GCGCTGGCAA CGACGCATTT ACCGCTGCGC GATATCGCAG ACGCTATCAC CCCTGCACTT
TTGCACGAAG TGATTGCTAT TTTGCATCAC GATTTGCGGA CCAAATTTGG TATTGCCGAA
CCGCGCATTC TGGTCTGCGG GCTGAATCCG CACGCGGGCG AAGGCGGTCA TATGGGTACG
GAAGAGATAG ACACCATTAT TCCGGTGCTC AATGAGCTGC GGGCGCAGGG GATGAAACTC
AACGGGCCGC TGCCTGCCGA TACCCTGTTT CAGCCGAAAT ATCTTGATAA CGCCGACGCC
GTGCTGGCGA TGTACCACGA TCAGGGTCTT CCCGTGCTAA AATACCAGGG CTTCGGGCGC
GGTGTGAACA TTACGCTGGG CCTGCCCTTT ATTCGCACAT CAGTGGACCA CGGCACCGCG
CTTGAACTGG CGGGACGTGG CAAAGCCGAT GTCGGCAGTT TTATTACGGC GCTTAATCTC
GCCATCAAAA TGATTGTTAA CACCCAATGA
|
|---|
| Protein sequence | MVKTQRVVIT PGEPAGIGPD LVVQLAQREW PVELVVCADA TLLTNRAAML GLPLTLRPYS
PNSPAQPQTA GTLTLLPVAL RAPVTAGQLA VENGHYVVET LARACDGCLN GEFAALITGP
VHKGVINDAG IPFTGHTEFF EERSQAKKVV MMLATEELRV ALATTHLPLR DIADAITPAL
LHEVIAILHH DLRTKFGIAE PRILVCGLNP HAGEGGHMGT EEIDTIIPVL NELRAQGMKL
NGPLPADTLF QPKYLDNADA VLAMYHDQGL PVLKYQGFGR GVNITLGLPF IRTSVDHGTA
LELAGRGKAD VGSFITALNL AIKMIVNTQ
|
|---|
| |