Gene Dd703_4023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_4023 
Symbol 
ID8087413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand- 
Start bp4664043 
End bp4665131 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content46% 
IMG OID644838118 
Product4-hydroxyphenylpyruvate dioxygenase 
Protein accessionYP_002989597 
Protein GI242241416 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins 
TIGRFAM ID[TIGR01263] 4-hydroxyphenylpyruvate dioxygenase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.431058 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAAAT TATTAGCCAA CCCACTCAAT TTAAATGGAT TTGCGTTTAT TGAATTTGTC 
ACCAATGACC CAGAAGCGAT GTCGACACTA TTCGTTTCTC TCGGGTTTAC TTGTGTTGCA 
CACCATCGTC ACCGTGCGAT TTCACTCTTT CGACAAAATA ATATCAACTT CCTTATTAAT 
AATACCGCTA CTGGTTTTCC GCGAACCTTT TTGCAGGAAC ATGGTGCAGG AGCCTGCGGT 
ATAGGATTTT ATGTCAAAGA TGCACACCAG GCGTATAAAC AGGCGCTGTT GTCCGGCGCC 
AGACCCGCAG AACAGGCCGC ATACCCAGGA GAAATTCAGG TGCCGGCTAT TGAGGGAATT 
GGTGGTTCAA AAATCTACTT CATCGAGAAA TATCATTCAG ATATCGATAT CTTTGATATC 
GAATTTTCAT TTATTCACGG AGTGGAAAAA AACCCGAAAG GATTCGGGCT GCACACCATT 
GACCACCTGA CTAATAATGT CTATCAGGGA AGAATGAATT ACTGGTCTGA ATTCTATAGC 
CGGATATTTA ATTTCCAGCA AATTCGTTAT TTTGATATTG CAGGCGAATA CACCGGTTTA 
CACTCAAAAG CCATGGCCGC ACCAGACGGA AAAATTCGTA TTCCTCTGAA TGAAGAAGCC 
GAAGGCAGCA ATGGGCAAAT TCAGGAATTC CTGCGTCGGT TTAATGGGGA AGGTATCCAG 
CATATCGCGA TGCAAACCGA TGATATTTTG ACGACGCTCG ATCAGCTGTA TCAGGCAGGA 
TTACCGCTGA TGACTGCACC GTCCGATACG TATTACCAGA TGGTGGAAGA ACGCCTGCCT 
GGTCACGGTC GGGATACCGC CGCACTACAA AAACACGGTA TTTTGCTTGA TGGCAACACC 
CACAATGGGC AGAAGAAACT GCTGTTGCAG ATTTTCTCTG AGACCCTCAT CGGCCCTCTG 
TTTTTTGAAT TCATCGAGCG GGATGGCGAC GAGGGCTTTG GCGAAGGTAA CTTCAAAGCG 
CTATTCGAAT CCATGGAGCG CGACCAACTG GCGCGCGGGG AAATCAATGT GACGACAGAA 
ACAGTCTAA
 
Protein sequence
MTKLLANPLN LNGFAFIEFV TNDPEAMSTL FVSLGFTCVA HHRHRAISLF RQNNINFLIN 
NTATGFPRTF LQEHGAGACG IGFYVKDAHQ AYKQALLSGA RPAEQAAYPG EIQVPAIEGI 
GGSKIYFIEK YHSDIDIFDI EFSFIHGVEK NPKGFGLHTI DHLTNNVYQG RMNYWSEFYS 
RIFNFQQIRY FDIAGEYTGL HSKAMAAPDG KIRIPLNEEA EGSNGQIQEF LRRFNGEGIQ 
HIAMQTDDIL TTLDQLYQAG LPLMTAPSDT YYQMVEERLP GHGRDTAALQ KHGILLDGNT 
HNGQKKLLLQ IFSETLIGPL FFEFIERDGD EGFGEGNFKA LFESMERDQL ARGEINVTTE 
TV