Gene Dd703_4015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_4015 
Symbol 
ID8087405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4655972 
End bp4657111 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content59% 
IMG OID644838110 
ProductUDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 
Protein accessionYP_002989589 
Protein GI242241408 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.371945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGATT TTCTACCTTT CTCACGCCCC GCGTTAGGTG AGGAAGAACT TGTCGCGGTC 
GGGCAGGTTC TTCGTTCCGG ATGGATTACC ACTGGCCCCA AAAATCAGGA ACTGGAGCAA
CAGTTTGCCG TTCTGACTGG GGCTAAACAG GCCATTGCGG TCAGTTCGGC AACCGGGGGG
ATGCACGTTA CCTTAATGGC GCTGGGGATT GGCGCTGGCG ATGAGGTGAT CACGCCCTCG
CTGACGTGGG TCTCGACGTT GAACATGATC GTACTTCTGG GCGCTGAGCC GGTCATGGTG
GATGTGGACA GAGATACGCT GATGGTGACG CCGGAAGCGA TTGAAGCCGC CATTACGCCG
CGCACCAAAG CGATTATTCC GGTGCATTAT GCCGGCGCGC CTGTCGATAT CGACGCCATT
CACGACATCG GCCGCCGTCA TGGCATCCCG GTGATTGACG ATGCCGCCCA CGCCGCCGGC
ACCTACTATC GCGGTCGCCA CGTTGGCGGC AGCGGTACGG CGATTTTCTC TTTCCACGCC
ATCAAGAACA TGACCTGCGC CGAAGGGGGA ATGGTCGTTA CTGACGATGA CGCGCTGGCC
AGCCGGATTC GTAGCCTTAA ATTTCATGGG TTGGGCGTAG ATGCGTTCGA TCGTATGGTG
CAAGGCCGCG CGCCGCAGGC GGAAGTGATT TCACCCGGGT TCAAGTACAA CCTGCCGGAC
ATCAGCGCCG CCATCGCGTT GGTACAACTG CAAAAACTGG CGGCCAACAA TGCTCGCCGC
GAAGCGCTGG CGCAGCGTTA TCTGCAAAAG CTGGCGGCGC TGCCCTATCA ACCGCTGGCG
TTGCCTGACT GGCCGCACCA GCATGCATGG CACCTGTTCA TCATCCGCGT GGATGAAGCG
CGTTGCGGCA TCAGCCGCGA CGGGTTGATG CAGGCGCTGA AAGAACGCGA TATCGGCACG
GGTTTGCATT TCCGCGCGGC CCACACTCAA AAATATTACC GTGAGCGCTT CCCGAATCCG
CATCTGCCCA ACACGGACTG GAACTCGGCG CGTATCTGTT CGCTGCCGCT GTTCCCGGAC
ATGCACGATG ACGATGTTGA CCGCGTAGTC GCGGCACTGA CGGAGTTGGC GGGAAAATAA
 
Protein sequence
MADFLPFSRP ALGEEELVAV GQVLRSGWIT TGPKNQELEQ QFAVLTGAKQ AIAVSSATGG 
MHVTLMALGI GAGDEVITPS LTWVSTLNMI VLLGAEPVMV DVDRDTLMVT PEAIEAAITP
RTKAIIPVHY AGAPVDIDAI HDIGRRHGIP VIDDAAHAAG TYYRGRHVGG SGTAIFSFHA
IKNMTCAEGG MVVTDDDALA SRIRSLKFHG LGVDAFDRMV QGRAPQAEVI SPGFKYNLPD
ISAAIALVQL QKLAANNARR EALAQRYLQK LAALPYQPLA LPDWPHQHAW HLFIIRVDEA
RCGISRDGLM QALKERDIGT GLHFRAAHTQ KYYRERFPNP HLPNTDWNSA RICSLPLFPD
MHDDDVDRVV AALTELAGK