Gene Dd703_3999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3999 
Symbol 
ID8087389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4639063 
End bp4640103 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content55% 
IMG OID644838094 
Productphosphate ABC transporter periplasmic substrate-binding protein PstS 
Protein accessionYP_002989573 
Protein GI242241392 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0226] ABC-type phosphate transport system, periplasmic component 
TIGRFAM ID[TIGR00975] phosphate ABC transporter, phosphate-binding protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTCA TGCGTACCAC TGTTGCCAGT ATTGTTGCTG CAAGCCTTTC TCTGACTGCG 
GTTTCTGCTT TTGCTGCAGC AAACCTCACT GGCGCAGGTG CGACATTCCC CGCTCCGGTT
TATGCCAAGT GGGCTGATTC CTACGAAAAA GAAACGGGTA ATAAGGTTAA CTATCAGGGC
ATCGGTTCTT CCGGCGGCGT AAAACAAATC ACCGCCAAAA CCGTTGACTT TGGTGCTTCC
GATGCGCCGC TGGCTGATGA CAAACTGGCT CAGGACGGCC TGTTCCAGTT TCCGACTGTG
ATTGGCGGTA TCGTTCTGGC GGTCAACCTG CCGGGCGTGA AAGCGGGTGA ACTGACGCTG
GATGGCAAAA CGCTGGGTGA TATCTACCTG GGCAACATCA AGAAATGGAA CGATGCGGCG
ATTGCCAAAC TGAACCCGGG CGTAAAACTG CCGGATCAGG ATATCGCTGT GGTGCGCCGT
GCCGACGGTT CCGGTACTTC CTACGTATTC ACCAGCTATC TGGCTAAGGT CAATGCCGAG
TGGAAAGAGA AGATTGGCGC GGGCAACACC GTAAACTGGC CGACTGGTCT GGGCGGTAAA
GGCAACGACG GCATCGCGGC TTTCGTTCAA CGTCTGCCGG GCGCCATCGG TTATGTGGAA
TATGCCTACG CCAAACAGAA CAATTTGACC TATACCAAAC TGATCTCTGC CGATGGCAAA
GCAGTGAGCC CGACCGGCGT CACGTTCAGC AATGCCGCCA AGGGCGTTGA CTGGAGCAAA
TCCTTCGCTC AAGACCTGAC CAACCAGAAA GGCGCGGATG TATGGCCGAT CACCTCAACC
ACCTTCATCC TGCTGCAAAA AGAGCAGAGT AAGCCGGAGC AGGGCACGGA AGTGCTGAAA
TTCTTCGACT GGGCCTACAA CAAGGGCGGC GATCAGGCGG TTGCGCTGGA TTACGCGACA
CTGCCGAAAG AGGTGGTATC TCAGGTGCGC GCTGCATGGA AAACCCAAAT CAAGGATAGC
AGCGGTAAGC CTCTGTACTG A
 
Protein sequence
MKLMRTTVAS IVAASLSLTA VSAFAAANLT GAGATFPAPV YAKWADSYEK ETGNKVNYQG 
IGSSGGVKQI TAKTVDFGAS DAPLADDKLA QDGLFQFPTV IGGIVLAVNL PGVKAGELTL
DGKTLGDIYL GNIKKWNDAA IAKLNPGVKL PDQDIAVVRR ADGSGTSYVF TSYLAKVNAE
WKEKIGAGNT VNWPTGLGGK GNDGIAAFVQ RLPGAIGYVE YAYAKQNNLT YTKLISADGK
AVSPTGVTFS NAAKGVDWSK SFAQDLTNQK GADVWPITST TFILLQKEQS KPEQGTEVLK
FFDWAYNKGG DQAVALDYAT LPKEVVSQVR AAWKTQIKDS SGKPLY