Gene Dd703_3998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3998 
Symbol 
ID8087388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4636800 
End bp4638635 
Gene Length1836 bp 
Protein Length611 aa 
Translation table11 
GC content56% 
IMG OID644838093 
Productglucosamine--fructose-6-phosphate aminotransferase 
Protein accessionYP_002989572 
Protein GI242241391 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains 
TIGRFAM ID[TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTGGAA TTGTAGGCGC AGTTGCGCAA CGAGATATTG CCGAGATCCT GCTGGAGGGG 
TTACGTCGCC TTGAGTACCG TGGCTATGAC TCTGCTGGCC TGGCAGTCGT AAATAGTGAG
GGGCGGGTGT CCCGTTTACG TCGTCTGGGG AAAGTTCAGG TGCTGGCCGA GGCGGTACAA
GATCATCCGT TGTCAGGGGG AACTGGGATT GCTCATACCC GCTGGGCGAC GCATGGCGAG
CCGTCCGAGC AGAACGCTCA CCCGCATGTA TCCGAACATA TCACCGTGGT GCATAACGGT
ATTATTGAGA ACCACGAATC GCTGCGAGAG CTGTTGGTTT CCCGTGGTTA TCATTTTGTT
TCTGAAACAG ATACCGAAGT AGTGGCCCAT CTGGTGCATT GGGAACAGCA ACAGAACGGG
GGCTCTCTAC GGGATGTCGT CCTGCGCGTG ATCGCGCAGT TGCGTGGTGC ATATGGCATG
GTGCTGATGG ACTGCCGTGA TCCCAACGTA TTGGTGGCGG CGCGCTCTGG CAGTCCGTTG
GTGATTGGTC GCGGCGTTGG TGAAAACTTT ATTGCCTCCG ATCAACTGGC GCTGCTGCCG
GTTACTCGTC GTTTTATCTT TCTGGAAGAG GGCGATATCG CCGAAGTTAC TCGCCGCACG
GTGAGTATCG TTAACCGTCA AGGGCAGGAC GTCAAACGCG AAGAGATCGA ATCGAACGTG
CAGTATGACG CTGGCGACAA AGGCGCTTAC CGTCACTACA TGCAGAAAGA GATCTTTGAG
CAGCCGATGG CTATCAAGAA TACGCTGGAA GGGCGTTTCA GCCATGGTGA AATCAATCTG
TCTGAGCTGG GGCCGCAGGC GGATGCCCTG CTGGCGAAAG TACAGCATAT TCAAATTATT
GCCTGTGGTA CGTCTTACAA TGCCGGTATG GTGTCGCGGT ATTGGTTTGA GTCGCTGGCC
GGTATTCCCT GTGATGTGGA AATCGCCTCG GAATTCCGTT ACCGCAAACC GGCAGTGCGC
GCCAACAGTT TGATGATCAC CCTGTCTCAG TCCGGTGAAA CTGCCGATAC GCTGGCGGCG
CTGCGTTTGT CGAAAGAACT GGGGTATCTG GGATCGCTGG CGATTTGCAA CGTGGCGGGT
TCATCCCTGG TGCGTGAGTC CGATCTGTCG TTGATGACCC GCGCAGGCGC TGAAATCGGT
GTGGCGTCTA CCAAGGCATT TACGACTCAG TTGACGGTGT TACTGTTGCT GGTGGCGCGT
GTTGGCCGTC TGCGTGGAAT GGATGCCGGC ATCGAGCAGG ATATCGTACA TGCTTTGCAG
GCCTTACCGG CGCGCATTGA ACAGATGTTA TCTCAGGACA AGCTGATTGA AGCGCTGGCG
GAAGGTTTCT CCGACAAGCA TCATGCGCTG TTCCTGGGGC GCGGCGACCA GTACCCGATC
GCGATGGAAG GGGCGCTGAA GCTGAAGGAG ATTTCCTATA TCCATGCGGA AGCCTATGCG
GCAGGCGAGT TGAAACATGG CCCGCTGGCG CTGATCGACG CCGATATGCC GGTGGTGGTG
GTGGCGCCGA ATAACGATCT GTTGGAAAAA TTGAAATCCA ACATCGAAGA AGTCCGCGCC
CGGGGTGGGG AACTGTACGT GTTTGCCGAT GAGGACGCCG GCTTCACCTC GGACAGCGAG
CTGATGAAGA TCATTCAGTT GCCGCATGTG GAAGACATGA TTGCGCCGAT CTTTTATACC
GTACCGTTGC AGTTGCTGTC TTATCATGTG GCGTTGATCA AAGGGACGGA CGTTGACCAA
CCCCGTAATC TGGCGAAATC GGTGACAGTG GAGTAA
 
Protein sequence
MCGIVGAVAQ RDIAEILLEG LRRLEYRGYD SAGLAVVNSE GRVSRLRRLG KVQVLAEAVQ 
DHPLSGGTGI AHTRWATHGE PSEQNAHPHV SEHITVVHNG IIENHESLRE LLVSRGYHFV
SETDTEVVAH LVHWEQQQNG GSLRDVVLRV IAQLRGAYGM VLMDCRDPNV LVAARSGSPL
VIGRGVGENF IASDQLALLP VTRRFIFLEE GDIAEVTRRT VSIVNRQGQD VKREEIESNV
QYDAGDKGAY RHYMQKEIFE QPMAIKNTLE GRFSHGEINL SELGPQADAL LAKVQHIQII
ACGTSYNAGM VSRYWFESLA GIPCDVEIAS EFRYRKPAVR ANSLMITLSQ SGETADTLAA
LRLSKELGYL GSLAICNVAG SSLVRESDLS LMTRAGAEIG VASTKAFTTQ LTVLLLLVAR
VGRLRGMDAG IEQDIVHALQ ALPARIEQML SQDKLIEALA EGFSDKHHAL FLGRGDQYPI
AMEGALKLKE ISYIHAEAYA AGELKHGPLA LIDADMPVVV VAPNNDLLEK LKSNIEEVRA
RGGELYVFAD EDAGFTSDSE LMKIIQLPHV EDMIAPIFYT VPLQLLSYHV ALIKGTDVDQ
PRNLAKSVTV E