Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_3976 |
Symbol | rbsC |
ID | 8087366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 4612052 |
End bp | 4613020 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644838072 |
Product | ribose ABC transporter permease protein |
Protein accession | YP_002989551 |
Protein GI | 242241370 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.144441 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTCTC AAACTATCCC GGCTAAGCGC CGGTTCAGCA AGCAGTGGTT GATGGAGCAG AAGTCCCTGA TCGCCTTACT GGTGCTCATT GCCGTGGTCT CTTCCATGAG CCCCAATTTC TTCACGCTGA ATAATTTGTT CAATATTCTG CAGCAGACAT CGGTCAACGC CATTATGGCC GTCGGGATGA CGCTGGTGAT CCTGACTTCC GGCATCGATT TGTCCGTTGG GTCGGTGTTG GCGCTGACGG GCGCGGTGGC CGCGTCTATC GTCGGGCTGG AGATCAATGC GTTGGTGGCG GTGTTCGCCG CTCTGGCGCT GGGTGCCGTT ATTGGCGCCG GTACCGGGAT TATCGTCGCC AAAGGCCGGG TTCAGGCGTT TATCGCCACG TTGGTCATGA TGCTGCTGTT ACGTGGCGTC ACCATGGTTT ATACCAACGG CAGCCCGGTT AATACCGGAT TTTCCTCAGC AGCGGACACT CTGGGGTGGT TCGGCATCGG TCGTCCTTTT GGCGTACCTG CGCCAATCTG GATTATGGCA GTGGTGTTTT TGGCGACCTG GTACATGCTG CACCATACCC GTCTCGGGCG TTATATCTAT GCGCTTGGCG GCAATGAAGC GGCAACACGC CTTTCCGGCA TCAGTGTTGA TAAGGTGAAG GTGGTGGTGT ACTCGCTGTG CGGCTTGTTA TCGGCGTTGG CGGGCATTAT TGAAGTGGCT CGCTTGTCGT CGGCGCAGCC AACGGCAGGG ACAGGTTATG AACTGGATGC CATCGCTGCG GTGGTGCTGG GGGGGACGAG CCTGTCCGGT GGTAAAGGGC GCGTGGTGGG AACGTTGATC GGGGCTCTGA TTCTGGGGTT CCTGAACAAT GGGCTTAACC TGTTAGGTGT TTCTTCTTAC TACCAGATGA TCGTCAAGGC TGTCGTTATT TTGCTGGCGG TTTTGGTAGA TAACAAAAGC AGTAAATAA
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Protein sequence | MSSQTIPAKR RFSKQWLMEQ KSLIALLVLI AVVSSMSPNF FTLNNLFNIL QQTSVNAIMA VGMTLVILTS GIDLSVGSVL ALTGAVAASI VGLEINALVA VFAALALGAV IGAGTGIIVA KGRVQAFIAT LVMMLLLRGV TMVYTNGSPV NTGFSSAADT LGWFGIGRPF GVPAPIWIMA VVFLATWYML HHTRLGRYIY ALGGNEAATR LSGISVDKVK VVVYSLCGLL SALAGIIEVA RLSSAQPTAG TGYELDAIAA VVLGGTSLSG GKGRVVGTLI GALILGFLNN GLNLLGVSSY YQMIVKAVVI LLAVLVDNKS SK
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