Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_3958 |
Symbol | |
ID | 8087344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 4587013 |
End bp | 4588836 |
Gene Length | 1824 bp |
Protein Length | 607 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644838050 |
Product | GTP-binding protein TypA |
Protein accession | YP_002989533 |
Protein GI | 242241352 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01394] GTP-binding protein TypA/BipA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.41781 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGATCGAAA ATTTGCGTAA CATCGCTATT ATTGCGCACG TTGACCATGG AAAAACCACC CTGGTTGACA AACTGCTGCA ACAATCCGGA ACGCTGGGTG AGCGTACAGA ACTTACCGAA CGTGTGATGG ACTCCAATGA CCTTGAAAAA GAACGCGGGA TTACCATCCT CGCGAAAAAC ACCGCCATTA ACTGGAATGG CTATCGCATC AATATCGTAG ACACCCCAGG ACACGCCGAC TTTGGCGGTG AGGTGGAGCG TGTGATGTCC ATGGTGGATT CCGTATTACT GCTGGTGGAT GCGATGGACG GCCCGATGCC GCAAACGCGC TTCGTGACCC AGAAAGCCTT TGCCTACGGA TTGAAGCCCA TCGTGGTCAT CAACAAGGTT GACCGCCCCG GCGCCCGCCC GGACTGGGTT GTGGATCAGG TTTTCGACTT GTTCGTCAAT CTGGGCGCTA CCGACGAGCA ACTGGACTTC CCGATTGTTT ACGCTTCCGC GTTGAACGGC ATTGCCGGTC TGGATCATAA CGACATGGCG GAAGACATGA CGCCGCTGTT TGAAGCGATC GTAAAACATG TTGAAGCGCC AAATGTGGAT CTCAACGGCC CATTCCAAAT GCAGATCTCC CAGTTGGATT ACAACAACTA CGTGGGTGTC ATCGGTATTG GTCGTATCAA GCGCGGCGTG GTGAAGCCGA ATCAGCAGGT CAGCATCATC GACAGCACCG GTAAAGTGCG TAATGCCAAA GTCGGCCAGG TGCTGGGCCA TCTGGGGCTG CAACGTATCG AGAGCGACAA GGCGGAAGCG GGCGACATCA TTGCGCTTAC CGGCCTTGGC GATCTGAACA TCTCCGATAC CGTGTGCGAC ACCGCGAATG TGGAAGCGCT GCCGGCTCTG TCTGTGGATG AACCGACAGT AACCATGTTC TTCTGCGTTA ATACCTCGCC TTTCTGCGGT AAAGAAGGCA AGTTCGTGAC TTCTCGCCAG ATTCTGGATC GTTTGCGTAA GGAATTGGTG CATAACGTCG CACTGCGCGT AGAAGAAACC GAAGACCCGG ATGCTTTCCG TGTGTCCGGT CGTGGTGAGC TGCACCTGTC TGTTCTGATT GAAAACATGC GTCGTGAAGG TTTCGAACTG GCGGTTTCCC GTCCGAAAGT TATCTTCCGT ACCATCGACG GTCGCCGCCA GGAACCGTTT GAACAAGTTA CTGTGGATAT CGAAGAACAG CACCAGGGTT CCGTCATGGA AGCACTGGGT CTGCGTAAAG GCGAAATGCG CGACATGATC CCGGATGGCA AGGGACGTGT TCGCCTGGAT TACGTCATCC CGAGCCGTGG TTTGATCGGC TTCCGTACCG ATTTTATGAC CATGACGTCC GGTACCGGTC TGCTGTATTC CACGTTCAGT CACTACGATG ACATCCGCCC AGGTGAAATC GGTCAGCGTC AGAACGGCGT ACTGATCTCC AACGGTCAGG GTAAAGCAGT CGCCTATGCG CTGTTCAGCC TGCAGGATCG CGGCAAATTG TTCCTGGGTC ACGGCGCCGA AGTGTATGAA GGCCAGATTA TTGGTATCCA TACTCGTTCC AACGACCTGA CGGTAAACTG CCTGACCGGT AAAAAGCTGA CCAACATGCG TGCCTCCGGT ACGGATGAGG CCACCGTGCT GGTTCCGCCG GTGAAAATGT CGCTGGAGCA GGCGCTGGAG TTTATTGACG ATGACGAGCT GGTGGAAGTT ACCCCGCAGT CGATTCGTCT GCGCAAGCGC CACCTGACGG AAAACGATCG CCGTCGCGCC AATCGTTCCA GCAAGGAAGA GTGA
|
Protein sequence | MIENLRNIAI IAHVDHGKTT LVDKLLQQSG TLGERTELTE RVMDSNDLEK ERGITILAKN TAINWNGYRI NIVDTPGHAD FGGEVERVMS MVDSVLLLVD AMDGPMPQTR FVTQKAFAYG LKPIVVINKV DRPGARPDWV VDQVFDLFVN LGATDEQLDF PIVYASALNG IAGLDHNDMA EDMTPLFEAI VKHVEAPNVD LNGPFQMQIS QLDYNNYVGV IGIGRIKRGV VKPNQQVSII DSTGKVRNAK VGQVLGHLGL QRIESDKAEA GDIIALTGLG DLNISDTVCD TANVEALPAL SVDEPTVTMF FCVNTSPFCG KEGKFVTSRQ ILDRLRKELV HNVALRVEET EDPDAFRVSG RGELHLSVLI ENMRREGFEL AVSRPKVIFR TIDGRRQEPF EQVTVDIEEQ HQGSVMEALG LRKGEMRDMI PDGKGRVRLD YVIPSRGLIG FRTDFMTMTS GTGLLYSTFS HYDDIRPGEI GQRQNGVLIS NGQGKAVAYA LFSLQDRGKL FLGHGAEVYE GQIIGIHTRS NDLTVNCLTG KKLTNMRASG TDEATVLVPP VKMSLEQALE FIDDDELVEV TPQSIRLRKR HLTENDRRRA NRSSKEE
|
| |