Gene Dd703_3946 details

Gene Information

• Locus tag: Dd703_3946
• ID: 8087331
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya dadantii Ech703
• Kingdom: Bacteria
• Replicon accession: NC_012880
• Strand: +
• Start bp: 4571970
• End bp: 4572605
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 644838037
• Product: TPR repeat-containing protein
• Protein accession: YP_002989521
• Protein GI: 242241340

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATACG CCGTAAACAT GCTGCTTTTC GCCAGTCTGG CGATAGGCGT CGCCGCCAAT 
GCCAGTACCG GCTTTGACAG CAACCTGATG GATATTCAGA AACAATGGTC AATCTGCGAA 
TATCAAACGC TAACCGCCAA AAAAGAATCG TGCTTCACCG CGCTGAGCCA GAAAACCCAC 
GCGCTGGCCG TCGCTAACCC GACACAGGCG GAATACCTGA TCTGGGAAGC CATCGCCAAC 
AGCAGCCTGG CCGGCGCCAA AGGCGGATTA GGCGCGCTGG ATCTGGTCAA GCAGGCCAAG 
GCGACGCTGG AAAAGGCCAT CGCCATTAAC CCGAAAGCGC TGGAAGGTTC CGCTTACACA 
ACGCTTGGCG CACTCTATTA CCAGGTTCCT GGGTGGCCGA TTGGTTTTGG CGACAACAAA 
AAAGCGGAAC AATACCTGAA GACTGCGCTG ACGATTAACC CCCAGGGGAT CGATCCCAAC 
TATTTCTACG GCGATTATTT GCTCAAAGAA GGGCGAAAAG ATGAAGCCAA ACGGTTTCTG 
AACATCGCAT TAGCGGCCGC CCCGCGCCCT GGCGGCGAAA TTGCCGATCA GGGACGGCGC 
TCTGCGGTTG AAAAAGCGTT ATCGCAGCTC AAATGA 

 

Protein sequence

MKYAVNMLLF ASLAIGVAAN ASTGFDSNLM DIQKQWSICE YQTLTAKKES CFTALSQKTH 
ALAVANPTQA EYLIWEAIAN SSLAGAKGGL GALDLVKQAK ATLEKAIAIN PKALEGSAYT 
TLGALYYQVP GWPIGFGDNK KAEQYLKTAL TINPQGIDPN YFYGDYLLKE GRKDEAKRFL 
NIALAAAPRP GGEIADQGRR SAVEKALSQL K