Gene Dd703_3941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3941 
Symbol 
ID8087326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4566960 
End bp4568111 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content63% 
IMG OID644838032 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002989516 
Protein GI242241335 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATCC TGGCCGTCAT GATCAGCGCT TCGCTGGTCG GCTTGGCGCA GGGGTACTCG 
ATTCCGCTGG TTTCCCTGAA GCTGACCGCG TTGGGATACG GTTCCGCGTT GATTGGCGTG
GTCGCCGCAT TGCCTGCCGT CGGGGTGTTT GTTTCTTCGC TGGCGGCGGC GCGGGTGGCG
ATGCGTATTC CGACCGGCCG TTTGCTGATG ATATCGACGC TGGGCATGGG ATGCTGTCTG
GGGCTGTCGT TTTGGCTGGA TAATGTGTGG CTGTTACTGG CGCCGCGTTT TCTGATGGGT
TTTTTCTGCG GGCTGATCAT CGTTATCGGC GAGTCCTGGG TGAGCGGTTG TACGCAAGCG
CGCCATCGCG GCGTGCTGGT GGGGCTGTAC GCCACGGCGT TTACCGGGTT GCAACTGTTG
GGGCCGTTGC TGATCGCGCT TGGCGGGCCG GGCGATGCGC GCGGCATGTT GCTGATTCTC
GCGCTGCATG GGGTCTGTCT GGTTATTACG GCGTTGGCGT CGTTTTCCGG GGTGGCGCAG
CCTGAGCAGC GACGCAGTAA TCTGTTCTCT CTGGCGTTGG CGGCGCCCGC ACTGATTGTG
GCGGTATTTG CGTTCGCGTT TTTTGATGGC GCCGTGCTTG CCATGTTGCC GCTGTATGGC
ATGGCGCATG GCTATGAGGA GCGGCTGGCG GTGCTGCTGG TCACGGTGCT GTTTGTCGGC
GATGCGCTGT TGCAGGCGCC GCTGGGCTGG CTATCCGACA GGCTTGGCAC GGTGCGAGTG
CATGTGTGCT GCGGCGCGCT GTTTGTCCTG ATGCTTGTCG CGCTGCCGCT CAGTTATGGC
ACGGGATGGG TCTGGGCCAA CGTATTTTTG CTGGGCGCGG TGGCGGGCAG TATTTATACC
CTATCGTTGG TACGGGCGGG CAAGCGGTTC CAGGGCATCG ATCTGGTGGC GATGAACGCG
CTGTTCGGCC TGCTGTGGGG AGCGGGCAGT TTTAGCGGGC CGCTGGTGAG CGGTGCGCTG
ATGCAGGGGT ATGGCAACGA TGGGCTGATC GCGGGGCTGA TACTGCTGGG GGGGCTGTTT
CTGCTGGCGA ATGCGTTGCC TGGGTTACGG CGGGAACGGC TGGAGAATAC GGCATACGCC
GAGGGCGATT AA
 
Protein sequence
MAILAVMISA SLVGLAQGYS IPLVSLKLTA LGYGSALIGV VAALPAVGVF VSSLAAARVA 
MRIPTGRLLM ISTLGMGCCL GLSFWLDNVW LLLAPRFLMG FFCGLIIVIG ESWVSGCTQA
RHRGVLVGLY ATAFTGLQLL GPLLIALGGP GDARGMLLIL ALHGVCLVIT ALASFSGVAQ
PEQRRSNLFS LALAAPALIV AVFAFAFFDG AVLAMLPLYG MAHGYEERLA VLLVTVLFVG
DALLQAPLGW LSDRLGTVRV HVCCGALFVL MLVALPLSYG TGWVWANVFL LGAVAGSIYT
LSLVRAGKRF QGIDLVAMNA LFGLLWGAGS FSGPLVSGAL MQGYGNDGLI AGLILLGGLF
LLANALPGLR RERLENTAYA EGD