Gene Dd703_3923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3923 
Symbol 
ID8087308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4545473 
End bp4546756 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content60% 
IMG OID644838014 
Producthypothetical protein 
Protein accessionYP_002989498 
Protein GI242241317 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0823] Periplasmic component of the Tol biopolymer transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAG AACAACAGTT AACGTTTGAT ACCGTTTCAC ATCAGTTAAC CAATATTAAT 
ATCTGGACAA CTGACGGTAA CTGGGTGATT TACGATGTAA GGCCGCATGG ATCTTTGTTT
ACAGGTTTGA CCATTGAGAA AGTCCATGTA GAGACTGGCC AGCAAACGGT TATCTATCGC
GCCGGACAGG GGGCGCATGT GGGAGTGGCG ACCGGCAGCC CGGTACTGCC GCAGCGTTAT
GTATTTATTC ATGGGCCGGC GCATCCGGAT GAACACTGGC AGTACGATTT TCACCATCGC
CGCGGCGTTA TGGTGCAGGA AGAGACGCCT GAGCAGGCCG TGACGCTGGA TGCCTGCGTG
ATTACCGCGC CTTATCCGGC CGGCGCATTG CGCGGCGGAA CCCATGTACA TGTTTTCAGC
CCGGACGGCA GCCGGTTGAG TTTTACTTAC AACGATCACG TCTTGCACGA GCGCGACCCG
GCGCTGGATT TGCGCAACGT CGGCGTGGCG GTGCCGCTGC GGTCGGTTGC GGCCCCCGGA
CGGCATCCTC GCGAGCATGA CGGCAGCCAT TACTGCGTAC TGGTCAGTCG GACGACGCCT
AAGCCACACC CCGGCAGCGA CGACATCAAC CGCGCGTATG AAGAGGGTTG GGTGGGCGTG
CAAGGCTATC TGCGGCCGGA TGGCGTGCGT CAGCGCTGGG CGCTGGCATT TATCGGCGAC
ACGCTGTCCG CCGACGGCGA GAAAGTACCG GAGGTGTTTA TCGTCGATCT GCCGGAAAAT
CTGGATGATT ATGCCATCGC CGGCGAACAA CCGCTGGGCG GCACGGCAAC CGCATTGCCC
GCGCCGCCGG CCGGTGTGTG TCAGCGGCGT CTGACGTTCA GCGCCGGGCG CCGTTATCCC
GGCGTCGTCA ATCAGCCGCG CCACTGGTTG CGCGCAGCGC CGGACGGCAG TGCGATCGCG
TTTCTGATGC GGGATGACGA TGGCATCGTG CAGTTGTGGA TCCTCTCGCC GAATGGCGGA
GAGCCCCGTC AGGTGACGCA GAGCGCCTGG CCGGTGCAAT CCGCTTTCAG CTGGCATCCC
GGCGGCGAAT ATGTGGCGTT TGTTGGCGAT AACAGCATCA TGGTGTGCGA AATGGCAAGC
GGTCGTGTGA TCCGGCAGAC GCCGCGCAGC GATATCCCGC CGGTTAGCGA TGCCGTCGTA
TTTTCTCCGG AAGGTTCCCG TATCGCCTAT TTGCGGGATA TTGACGGCTG CAACCAGATT
TTTGTGGTGG AAGTGGTGTG GTAA
 
Protein sequence
MNKEQQLTFD TVSHQLTNIN IWTTDGNWVI YDVRPHGSLF TGLTIEKVHV ETGQQTVIYR 
AGQGAHVGVA TGSPVLPQRY VFIHGPAHPD EHWQYDFHHR RGVMVQEETP EQAVTLDACV
ITAPYPAGAL RGGTHVHVFS PDGSRLSFTY NDHVLHERDP ALDLRNVGVA VPLRSVAAPG
RHPREHDGSH YCVLVSRTTP KPHPGSDDIN RAYEEGWVGV QGYLRPDGVR QRWALAFIGD
TLSADGEKVP EVFIVDLPEN LDDYAIAGEQ PLGGTATALP APPAGVCQRR LTFSAGRRYP
GVVNQPRHWL RAAPDGSAIA FLMRDDDGIV QLWILSPNGG EPRQVTQSAW PVQSAFSWHP
GGEYVAFVGD NSIMVCEMAS GRVIRQTPRS DIPPVSDAVV FSPEGSRIAY LRDIDGCNQI
FVVEVVW