Gene Dd703_3908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3908 
Symbol 
ID8087293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4529437 
End bp4530777 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content54% 
IMG OID644837999 
ProductCitrate carrier protein 
Protein accessionYP_002989483 
Protein GI242241302 
COG category[C] Energy production and conversion 
COG ID[COG3493] Na+/citrate symporter 
TIGRFAM ID[TIGR00783] citrate carrier protein, CCS family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATG CAAAAGCTGA AATGATGAGC GAAAATATGC TCGCCGCTTC CGCACCAACA 
GGCTTTAGCC TAAATAAGAT CCAGATTGGG TCTGTACCGT TTATTCTTTT TCTGGCTATC
GGCGTCGTCG TGTTTATTGC CGCCTATGCC GGATATCTGC CTAAAAATAT GATCGGCGGA
TTTGCCGTAA TTATGACGAT GGGTTTTTTA CTGGCTCACA TCGGCCGGTT AATTCCCGTA
CTTAAAGATG TTGGCGGCCC AGCCATTCTT TGTCTGATGG TTCCTTCCGT GCTGGTTTAT
TTCCACATGT TCAATGCGAA TACGCTGGAT ACGGTTAAGC TACTGATGAA GGATGCCAAT
TTCCTGTATT TCGTCATCGC CAGTCTGGTC GTGGGCAGTA TTCTCGGTAT GAATCGCGTC
ATCCTGATTC AGGGTATGGT GCGTATGTTC ATTCCGTTGG TCATCGGCAC CTTTACCGCC
GTCGTCACCG GCCTGCTGGT CGGTAAACTG TTCGGCTATA CCTTCTACCA CACCTTCTTC
TTCATCATCG TTCCGATCAT CGGCGGCGGC ATCGGCGAAG GCATTCTGCC GCTTTCGCTG
GCTTACTCGT CCATTCTCGG CCAGACGCCG GATGTGTACG TGGCCCAGCT CGCACCGGCT
GCGGTTGTCG GTAATATTTT CGCCATCATC TGCGCGGGCG TACTGGCTCG CCTCGGTACG
GTACGCCGCG ACCTGAACGG CAACGGCAAT CTGGTGCGCA ACGCCGACGA TAACGCCATT
TTCTCCGTGA AAGAAGCGCC TAAAGTCATC GATTTCCACC TGATGGGCGG CGGCCTGCTG
TTGATCTGCA CCTTCTTCAT CGTCGGCGGC TTGTTCGAGA AGGTTGTGCA CATCCCCGGC
CCGGTTCTGA TGATCCTGAT CGCGGTCATG TGCAAATACG GTCGTGTGAT TCCGGAAAGT
ATGGAAACCG GCGCCAACAG CTTCTACAAA TTCGTTTCCA GCTCACTGGT GTGGCCGCTG
ATGATTGGCC TCGGCATGCT TTACGTGCCG CTGGAAAGTG TGGTGGCCGT GTTCTCCGTC
GGTTATGTGG TAGTCTGCGC GTCCGTCGTG ATGTCCATGG CGCTGATTAG CTTCTTTATC
GCACCCTACC TGAAGATGTA CCCGATCGAA GCCTCTATCG TCACCAGCTG CCACAGCGGT
TTGGGCGGCA CCGGCGACGT CGCGATTCTG TCCGCGTCCA ACCGCATGTC CCTGATGCCG
TTTGCACAAA TCGCAACTCG CATCGGCGGT GCATCCACCG TTATCTGCGC CACCCTGCTG
ATGAGCTGGA TCATGCGCTG A
 
Protein sequence
MKNAKAEMMS ENMLAASAPT GFSLNKIQIG SVPFILFLAI GVVVFIAAYA GYLPKNMIGG 
FAVIMTMGFL LAHIGRLIPV LKDVGGPAIL CLMVPSVLVY FHMFNANTLD TVKLLMKDAN
FLYFVIASLV VGSILGMNRV ILIQGMVRMF IPLVIGTFTA VVTGLLVGKL FGYTFYHTFF
FIIVPIIGGG IGEGILPLSL AYSSILGQTP DVYVAQLAPA AVVGNIFAII CAGVLARLGT
VRRDLNGNGN LVRNADDNAI FSVKEAPKVI DFHLMGGGLL LICTFFIVGG LFEKVVHIPG
PVLMILIAVM CKYGRVIPES METGANSFYK FVSSSLVWPL MIGLGMLYVP LESVVAVFSV
GYVVVCASVV MSMALISFFI APYLKMYPIE ASIVTSCHSG LGGTGDVAIL SASNRMSLMP
FAQIATRIGG ASTVICATLL MSWIMR