Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_3907 |
Symbol | |
ID | 8087292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 4526720 |
End bp | 4528327 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644837998 |
Product | extracellular solute-binding protein family 5 |
Protein accession | YP_002989482 |
Protein GI | 242241301 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAACT CCCTGATTAA ATCAAGGGTA TTGAAATTCA GCCTTGGTCT GCTGGCGCTG TCCGTAGCCG CTGGCGTACA GGCGAAAACA CTGGTGTATT GCTCGGAAGG TTCGCCGGAA GGGTTTAATC CGCAGTTGTT TACTTCCGGC ACCACGTTTG ATGCCAGCTC GCTTCCTATT TACAACCGTT TGGTGGAATT CAAAAGCGGC ACCACGGAGA TTGAGCCGGG TCTGGCCGAG AAGTGGGACA TCAGTGCAGA TGGCAAAACC TATACTTTTC ACCTGCGTAA AGGTGTGAAG TGGCAGGACG GCAAAGAATT TAAACCGAGC CGCACGCTTA ACGCGGACGA TGTACTGTTC TCCTTCCAGC GTCAGCTGGA CGCCAACCAC CCGTATCACA AGGTATCCGG CGGCAGTTAC GAATACTTTG AAGGCATGGG GATGCCGGAA CTGATCAGCA AGATCGAAAA AGTGGACGAT GACACGGTTC GCTTCCAGCT GACCCGCGCT GAAGCGCCGT TCCTGGCCGA TTTGGCGATG GACTTCGCTT CCATTCTGTC CGCTGAGTAC GCCGACAAGA TGCTCAAAGC CGGCACGCCG GAAAAAATCG ACCTGGATCC GATCGGTACC GGCCCGTTCC AGTTGCAGCA GTACCAGAAA GATTCCCGTA TCCTCTACAA GCGTTTCGAC GATTTCTGGG GCACCAAACC GGGTATCGAT CGTCTGGTTT TCTCCATCAC GCCTGACGCC TCTGTCCGTT ATGCCAAGTT GCAGAAAAAC GAATGTCAGA TCATGCCGTA TCCGAATCCG GCGGATCTGG CCAGCATGAA GCAGGATAAA AACATCAACC TGCTGCAGAA ACCGGGGCTG AACGTCGGTT ATCTGTCCTA CAACGTCGAG AAGAAACCGC TGGACAACGT GAAAGTGCGT CAGGCGCTGA CTTACGCGGT CAACAAGCAG GCCATCATCG ACGCGGTGTA TCAGGGCGCC GGCCAGGCGG CCAAGAACCT GATTCCGCCG ACGATGTGGG GTTATAACGA CGATGTGAAG GACTACGTTT ACGATCCGGT CAAGGCGAAA GCGTTGCTGA AGGAAGCCGG TCTGGAAAAC GGTTTCGAGA TCGACCTGTG GGCGATGCCG GTACAGCGTC CGTACAACCC GAACGCCCGT CGTATGGCGG AGATGATTCA GGCTGACTGG GCGAAAGTCG GCGTGAAAGC CACCATCGTC ACCTACGAAT GGGGTGAGTA CCTGAAACGC GCCAAAGCCG GCGAACACCA GACCGTGCTG ATGGGCTGGA CGGGCGACAA CGGGGATCCG GATAACTTCC TGGCCACCCT GTTCAGCTGC GACGCGGCGA AGAAAGGTTC CAACTACTCC AAGTGGTGCT ACAAGCCGTT TGAGGATTTG ATTCAACCGG CGCGTGCAAC TTCCGATCAG GCTAAACGTA TCGAGCTGTA CAAACAGGCT CAGGTGGTGA TGCACGATCA GGCGCCTGCG CTGATTGTGG CTCACTCCAC TGTGTACGAA CCGATCCGTC AAAACGTGAA GGGCTATGTC ATCGAGCCGC GCGGCGTGCA TAGCTTCAAC CACGTATCAT TAGATTAA
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Protein sequence | MANSLIKSRV LKFSLGLLAL SVAAGVQAKT LVYCSEGSPE GFNPQLFTSG TTFDASSLPI YNRLVEFKSG TTEIEPGLAE KWDISADGKT YTFHLRKGVK WQDGKEFKPS RTLNADDVLF SFQRQLDANH PYHKVSGGSY EYFEGMGMPE LISKIEKVDD DTVRFQLTRA EAPFLADLAM DFASILSAEY ADKMLKAGTP EKIDLDPIGT GPFQLQQYQK DSRILYKRFD DFWGTKPGID RLVFSITPDA SVRYAKLQKN ECQIMPYPNP ADLASMKQDK NINLLQKPGL NVGYLSYNVE KKPLDNVKVR QALTYAVNKQ AIIDAVYQGA GQAAKNLIPP TMWGYNDDVK DYVYDPVKAK ALLKEAGLEN GFEIDLWAMP VQRPYNPNAR RMAEMIQADW AKVGVKATIV TYEWGEYLKR AKAGEHQTVL MGWTGDNGDP DNFLATLFSC DAAKKGSNYS KWCYKPFEDL IQPARATSDQ AKRIELYKQA QVVMHDQAPA LIVAHSTVYE PIRQNVKGYV IEPRGVHSFN HVSLD
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