Gene Dd703_3871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3871 
Symbol 
ID8087256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4486511 
End bp4487437 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content57% 
IMG OID644837962 
Productbranched-chain amino acid transporter permease subunit LivH 
Protein accessionYP_002989446 
Protein GI242241265 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.911793 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGAGC AGTTCCTCTA TTTCCTTCAG CAGATGTTCA ACGGTCTGAC GTTGGGCAGC 
ACTTATGCGC TGATCGCCAT TGGCTACACC ATGGTTTACG GCATTATCGG CATGATCAAC
TTCGCTCACG GCGAGGTTTA CATGATCGGC AGCTACGTCT CTTTCATCGT GATTGCCGCA
TTGATGATGA TGGGCATCGA TACCAGCTGG TTGCTGATTG GCACAGCCTT TATCGCCGCG
GTTGTGATTT CCAGCGCCTA CGGCTGGAGC ATTGAACGTG TGGCCTACAA ACCGGTGCGC
GACTCCAAAC GGTTGATCGC CTTGATTTCC GCCATCGGTA TGTCGATTTT CCTGCAGAAC
TACGTCAGCC TGACGCAAGG TTCTCGTGAT GTCGCGCTGC CCAGCCTGAT CCAGGGCCAG
TGGGTGTTAG GTGAAAGCAA TGGTTTCGCC GCGACCATCA CCACCATGCA GTTGACTATC
TGGGTGGTGA CGTTTCTGGC AATGCTGGCA TTGACCCTGT TTATTCGTTA TTCCCGCATG
GGCCGCGCCT GTCGCGCCTG TTCGGAAGAT CTGAAAATGA CCAGCCTGCT TGGCATCAGC
ACCGACCGCG TGATTTCGCT GACGTTCATC ATCGGCGCGA CGATGGCGGC GGTGGCCGGC
GTGCTGCTGG GCCAGTTCTA TGGCGTGATT AACCCCTATA TCGGATTTAT GGCCGGGATG
AAGGCGTTCA CCGCCGCAGT GCTGGGCGGT ATCGGCAGTA TTCCCGGCGC GATGATCGGC
GGCCTGGTGC TGGGTATCAC CGAGGCGCTG ACCTCGGCCT ATCTCAGCAC CGAATACAAG
GACGTGGTGT CTTTCGCGTT GTTGATTGTC GTTCTGCTGG TGATGCCCAC CGGTATTCTC
GGGCGTCCGG AGGTGGAGAA GGTATGA
 
Protein sequence
MSEQFLYFLQ QMFNGLTLGS TYALIAIGYT MVYGIIGMIN FAHGEVYMIG SYVSFIVIAA 
LMMMGIDTSW LLIGTAFIAA VVISSAYGWS IERVAYKPVR DSKRLIALIS AIGMSIFLQN
YVSLTQGSRD VALPSLIQGQ WVLGESNGFA ATITTMQLTI WVVTFLAMLA LTLFIRYSRM
GRACRACSED LKMTSLLGIS TDRVISLTFI IGATMAAVAG VLLGQFYGVI NPYIGFMAGM
KAFTAAVLGG IGSIPGAMIG GLVLGITEAL TSAYLSTEYK DVVSFALLIV VLLVMPTGIL
GRPEVEKV