| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3870 |
|---|
| Symbol | livM |
|---|
| ID | 8087255 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 4485237 |
|---|
| End bp | 4486514 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644837961 |
|---|
| Product | leucine/isoleucine/valine transporter permease subunit |
|---|
| Protein accession | YP_002989445 |
|---|
| Protein GI | 242241264 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCTT ATGTGTTGAT TAATGCCGTG GTATCGGCGC TGATACTGCT GGTGCTGGCG
GCGTTCGTTA TGGGCATGCA GCTCAGTTTG GATGGCACAC GGCTGGTGGT GCATGGCGCG
GAGACGGTGC GTTGGTATTG GATTGGCGCG GCTTGCGCGG TGGTCTTTCT GTTCCAGCTG
TTGCGTCCGT TGTTGCAACG GGGTACGAGA AAAATAGCCG GCGCCGGCAA TCTGGTGCTG
CCGAGTTTTG ACGGCAGTAC GCCGCGTCAA AAACTGTTGG CGTTGGCGTT GATTGCCGCC
GCGATCATGT GGCCGTTTTT AGTTTCTCGC GGCACGGTGG ATATCGCTAC TCTGACGCTG
ATTTACGTCA TGCTGGGTCT GGGGTTGAAC GTAGTGGTCG GGTTGTCTGG CTTGCTGGTG
CTGGGTTACG GCGGTTTTTA TGCCATCGGC GCCTACACCT ATGCCTTGCT GAGCCACTAC
TACGGTCTGG GGTTCTGGCA ATGTTTGCCG CTGGCGGGGC TGACGGCGGC GCTGTCCGGT
TTCCTGCTGG GGTTCCCGGT ACTCAGGCTA CGCGGCGACT ATCTGGCGAT CGTCACGCTG
GGGTTCGGTG AAATTGTACG TATCTTGTTG TTGAACAACA CCGGTTTCAC TGGCGGGCCG
AACGGTATCA GCCAAATCCC CAAGCCCACG TTGTTCGGAC TGGAGTTCAA CCGTGCGTCG
CGTGAAGGCG GTTGGGATAC CTTCCACCAC TTTTTCGGGC TGACTTACGA TCCCAGCGAC
CGCATTATTT TCCTCTATAT GGTGGCACTG CTACTGGTGC TGTTGACGCT GTTTATTATC
AATCGGTTGC TGCGTATGCC GCTGGGCAGG GCGTGGGAAG CGCTGCGCGA AGATGAAATC
GCCTGTCGTT CACTGGGCCT GAGCCCGACC AAAATCAAAT TGACGGCGTT CACCATCAGC
GCGGCGTTCG CCGGTTTCGC CGGCACGCTG TTCGCGGCCC GTCAGGGGTT TGTCAGCCCG
GAATCCTTCA CCTTCGTCGA GTCAGCCTTT GTGCTGGCGA TTGTGGTATT GGGCGGGATG
GGCTCGCAGT TCGCCGTCAT TCTGGCGGCG GTTTTGCTGG TGGTGTCCCG TGAGCTGATG
CGTGACCTGA ACGAATACAG CATGTTGTTG CTGGGAGCGT TGATGGTACT GATGATGATC
TGGCGTCCTC AGGGGCTGCT GCCGATGAAA CGTCCGCAGA TGAAGCTGCA GATTGAGAAG
AAGGAAGGGC AGGCATGA
|
|---|
| Protein sequence | MKPYVLINAV VSALILLVLA AFVMGMQLSL DGTRLVVHGA ETVRWYWIGA ACAVVFLFQL
LRPLLQRGTR KIAGAGNLVL PSFDGSTPRQ KLLALALIAA AIMWPFLVSR GTVDIATLTL
IYVMLGLGLN VVVGLSGLLV LGYGGFYAIG AYTYALLSHY YGLGFWQCLP LAGLTAALSG
FLLGFPVLRL RGDYLAIVTL GFGEIVRILL LNNTGFTGGP NGISQIPKPT LFGLEFNRAS
REGGWDTFHH FFGLTYDPSD RIIFLYMVAL LLVLLTLFII NRLLRMPLGR AWEALREDEI
ACRSLGLSPT KIKLTAFTIS AAFAGFAGTL FAARQGFVSP ESFTFVESAF VLAIVVLGGM
GSQFAVILAA VLLVVSRELM RDLNEYSMLL LGALMVLMMI WRPQGLLPMK RPQMKLQIEK
KEGQA
|
|---|
| |