Gene Dd703_3867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3867 
Symbol 
ID8087252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4482505 
End bp4483689 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content60% 
IMG OID644837958 
Productputative transcriptional regulator, GntR family 
Protein accessionYP_002989442 
Protein GI242241261 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAACGG ATGGGTTACT GGCGCAGCGT ATGGCGCGCC TGAAAAGCTC CGCAATTCGT 
GAATTGCTGA AGCACAGCAA AATGGACGGC GTGATTTCGT TGGCGGGCGG CATTCCTTCT
GAAGCGTTAT TTGATTTCCA GGGGCTTAAC GAAGCGACCC AACGGGCGAT TACCGAACAG
CCGTCATCGG CGTTCCAATA TGGCCTGACC GAGGGCAGCC CGGTATTGCG TGAGCGTATC
GCCGAACTGT GCGCGTTACG CGGCATCAAG ACCCACGCGG AAGAGATTGT CGTGACCGCC
GGTTCCCAGC AGGCGCTGGA TCTGGTGATG CGCGCGACCG CCAACCCGCA GGATATTTTT
GTGGTGGAGC GCCCGACCTA TCTGGCGGCG CTGCAAACGC TGGAGCTGGC CGAAGCGCAG
GTGATGTCGG TCGGATCCGA CGAGTACGGC ATGGTGGTGG ACGAACTGGC CGCGCTGCTG
GAAACCACGC GCATCAAAGG CGTGTATCTG GTGCCGAATT TCGGCAATCC GAGCGGTGTG
ACGCTGAGCG AAGCCCGCCG TCGTCAACTG CTGGAACTGG CGGTACGCCA CGGTTTTCTG
ATCATTGAAG ACGATCCGTA TGGCGAACTG CGCTTTACCG AGACGCGCCA AACGACGATT
TACCAGCTGG CGCAAGAGGC TGGCCATGCC GATCGCGTGG TGTATACCTC GTCGTTCTCC
AAGATTCTGG CGCCGGGGCT GCGTCTGGGC TGGGCGATTC TGCCCGACTG GCTGCTGCAC
AAAGTGGCGA TCATCAAACA GGCCGCCGAC CTGCACGCCA GCTCGCTGTC TCAGACTATC
GTGGAATACT ATCTGGGAAC CGGGCGTCTG CCGGCGCAGA TTGACAAGAT TCGTGAGGCT
TACCGCCAGA AAGGCGAACT GCTGTCCGAA CTGATGGCCA GTGAGCTGGG GGATGTCATC
GAATTCAACC AGCCGGAAGG CGGGATGTTC CTGTGGGCGC GTTTCCGTCA ACCGTTCGAT
ACCACCGCTT GGTTGCAGAA GACGCTGGAA CAAGGCGTGG TATTCGTGCC CGGTGAATTC
TTCTTCGCCG ACCATCCAGA TCGCTCAACG CTGCGCCTCT CTTTCGCGAC CGCGACACAA
GAGCAGATGC ATGAAGCCGT AGCCCGCCTG CGGCGCGCGC TGTAA
 
Protein sequence
MSTDGLLAQR MARLKSSAIR ELLKHSKMDG VISLAGGIPS EALFDFQGLN EATQRAITEQ 
PSSAFQYGLT EGSPVLRERI AELCALRGIK THAEEIVVTA GSQQALDLVM RATANPQDIF
VVERPTYLAA LQTLELAEAQ VMSVGSDEYG MVVDELAALL ETTRIKGVYL VPNFGNPSGV
TLSEARRRQL LELAVRHGFL IIEDDPYGEL RFTETRQTTI YQLAQEAGHA DRVVYTSSFS
KILAPGLRLG WAILPDWLLH KVAIIKQAAD LHASSLSQTI VEYYLGTGRL PAQIDKIREA
YRQKGELLSE LMASELGDVI EFNQPEGGMF LWARFRQPFD TTAWLQKTLE QGVVFVPGEF
FFADHPDRST LRLSFATATQ EQMHEAVARL RRAL