Gene Dd703_3860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3860 
Symbol 
ID8087245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4468023 
End bp4468910 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content58% 
IMG OID644837951 
Productglycerol-3-phosphate transporter permease 
Protein accessionYP_002989435 
Protein GI242241254 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGCTT CCCGTCCTGT TTTTGGCCGC AGCCTGCTGC CTTACCTGCT GGTGCTGCCG 
CAGCTGGCCA TCACGATGAT CTTCTTCATC TGGCCTGCCG GGCAGGCGCT CTGGTATTCG
GTACAGAGTG TGGATCCGTT CGGCCTCTCC AGCCGGTTTG TCGGGCTGGA TAATTTCCTC
AATCTGCTTC ACGACAGCTA TTACCTCGGC GCGTTTTACA CCACGTTGTT GTTCAGTTTT
TTGGTGGCGG CGTCTGGGCT TATCGTGTCG CTGTTTCTGG CCGCGCTGGT GGATTACACC
CTGCGCTTCA GCCGCCTGTA TCAGACGTTG CTGATTCTGC CTTACGCCGT GGCGCCCGCA
GTGGCGGCGG TGCTGTGGAT GTTTCTGTTC AATCCCGGTC TGGGGTTGAT TACCTGGCTG
CTGCACCAGT GGGGTTACGA TTGGAACCAC GCCCAGTACA GCGGCCAGGC GATGTTTCTG
GTGGTATTGG CCTCGGTGTG GAAGCAGATT AGCTACAACT TCCTGTTTTT CCTGGCGGCG
TTGCAGTCCA TTCCCCGTTC GCTGATTGAA GCGGCGGCGA TTGACGGCGC CGGGCCGGTG
CGCCGTTTCT TCAATCTGGT GCTGCCGCTG ATTTCGCCGG TGAGTTTCTT CCTGCTGGTG
ATCAACCTGA ACTACGCCTT TTTCGACACC TTCCCGGTGA TTGACGCCGC CACCGGCGGT
GGGCCGGTGC AAGCGACAAC CACGTTGATC TACAAGATTT ATCGCGAAGG GTTTGCCGGC
CTTGATCTCT CCAGTTCGGC GGCGCAGTCG GTGGTGTTGA TGCTGGTGGT GAGCGTGTTG
ACGGTGATTC AGTTCCGCTT TGTCGAGCGT AAGGTGAACT ATCAATGA
 
Protein sequence
MTASRPVFGR SLLPYLLVLP QLAITMIFFI WPAGQALWYS VQSVDPFGLS SRFVGLDNFL 
NLLHDSYYLG AFYTTLLFSF LVAASGLIVS LFLAALVDYT LRFSRLYQTL LILPYAVAPA
VAAVLWMFLF NPGLGLITWL LHQWGYDWNH AQYSGQAMFL VVLASVWKQI SYNFLFFLAA
LQSIPRSLIE AAAIDGAGPV RRFFNLVLPL ISPVSFFLLV INLNYAFFDT FPVIDAATGG
GPVQATTTLI YKIYREGFAG LDLSSSAAQS VVLMLVVSVL TVIQFRFVER KVNYQ