| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3857 |
|---|
| Symbol | ugpQ |
|---|
| ID | 8087242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 4465323 |
|---|
| End bp | 4466069 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644837948 |
|---|
| Product | cytoplasmic glycerophosphodiester phosphodiesterase |
|---|
| Protein accession | YP_002989432 |
|---|
| Protein GI | 242241251 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGTT GGCCTTATCC CGCCATTGTC GCCCATCGCG GCGGCGGTGC GCTGGCGCCG
GAAAACACGT TGGCGGCGAT TGATGTCGGC GCACGGCATG GGCACCGGAT GATTGAGTTT
GACGCCAAGC TGTCTCAGGA CGGCCAGATT TTCCTGTTGC ACGACGATAC GTTGGAACGC
ACCAGTAACG GTTGGGGCGT GGCGGGCGAG TTGCCGTGGG ACAAACTGGT CGGGCTGGAT
GCCGGCGCCT GGTTCGGCGG TCAATTTTGT GGCGAGCGGC TGCCGTTGTT GTCGGAGGTG
GCCAGGCGCT GCGCGCAGTA TGACATGGCG GTGAATATCG AGATTAAACC CACCACCGGC
TGTGAGGTGG AAACCGGCCG GGTGGTGGCG CTGGCCGCGC GCGAGCTGTG GCGCGCACAA
CCGGTTGCGC CGTTGCTGTC GTCGTTTTCC GTCGAGGCGC TGGAAGCCGC GCAGCAGGCG
GCGCCGGAAC TGCCGCGCGG GTTGCTGCTG GATGAATGGG ATGACGATTG GCTCGCGCTG
ACCCAACGGC TGGGCTGCGT GTCGATTCAT CTCAACCACA AGGTGTTGGA TGACGCGCGC
GTGAGGCAAT TGAAAGACGC CGGGCTGCAC ATTCTGGTCT ACACCGTTAA CCAGCCGGAG
CGGGCGCGCA CGCTGCTGCA ATGGGGCGTT GACTGCATCT GTACCGACCG GATAGATTTG
ATCGGACCAC AATTCAACGC CGGCTAA
|
|---|
| Protein sequence | MNSWPYPAIV AHRGGGALAP ENTLAAIDVG ARHGHRMIEF DAKLSQDGQI FLLHDDTLER
TSNGWGVAGE LPWDKLVGLD AGAWFGGQFC GERLPLLSEV ARRCAQYDMA VNIEIKPTTG
CEVETGRVVA LAARELWRAQ PVAPLLSSFS VEALEAAQQA APELPRGLLL DEWDDDWLAL
TQRLGCVSIH LNHKVLDDAR VRQLKDAGLH ILVYTVNQPE RARTLLQWGV DCICTDRIDL
IGPQFNAG
|
|---|
| |