| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3851 |
|---|
| Symbol | cpxA |
|---|
| ID | 8087236 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 4458552 |
|---|
| End bp | 4459922 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644837942 |
|---|
| Product | two-component sensor protein |
|---|
| Protein accession | YP_002989426 |
|---|
| Protein GI | 242241245 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.257653 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAACA GCCTGACCGC GCGTATCTTC GCTATTTTTT GGTTGACGCT GGCGCTGGTG
CTGGTGCTGG TGCTGTTGTT GCCCAAACTG GATTCCCGCC AGCTGACGCC ATTGCTGGAA
AGCGAGCAAC GCCAGGGGTT GATGCTGGAA CAGCACATCG AAATGGAACT GGCCACCGAC
CCGGCCAACG ACCTGCTCTG GTGGCGACGC CTGTTCCGCG TGATCGACAA ATGGGCGCCG
CCCGGCCAGC GTTTGCTGTT AGTCACCAGC GAAGGGCGTG TCATCGGCGC GCAGCGTCAG
GAAATGCAGA TCGTCCGTAA CTTTATCGGC CAGTCCGATA ACGCGGATTT CCCGCAGAAA
AAGAATTACG GTCGAGTGGA ATTGCTGGGG CCATTCGCCA TCCGCGACGG CGAAGACAAC
TACATGATGT ACATGATTCG CCCAGCCAAC AGCCCGCAAT CCGATTTCAT CAATCTGTTG
TTTGACCGCC CGTTGCTGCT GTTATTGGTC ACGATGCTCA CCAGCTCGCC GCTGTTGCTG
TGGCTGGCCT GGAGCCTGGC AAAACCGGCG CGGAAGCTGA AAAATGCCGC GGATGACGTC
GCCCGAGGCA ACCTGCGCCA GCACCCGGAA CTGGAATCCG GCCCGCAGGA ATTTCGCGCC
ACCGGCTCCA GTTTCAACCA GATGGTTAGC GCGCTTGAAC GCATGGTCAC GGCCCAACAA
CGTCTGTTGT CCGATATTTC CCACGAACTG CGTACTCCGC TGACCCGTTT ACAATTGGCG
ACGGCGCTGC TGCGGCGGCG TCAGGGCGAA AATAACGAGC TGAATCGCAT TGAAACGGAA
ACCCAACGGC TCGACAGCAT GATCAATGAT TTGCTGGTGC TGTCGCGTAA TCAGCATAAA
AACGAACTGT CGCGCGAAGT GCTAAAAGCG GACGAACTGT GGAGCGATGT GCTGGCCGAT
GCCGGTTTTG AAGCGGAACA GATGGGGAAA ACGCTGGAGG TGCTTGCGCC GCCGGGCCCA
TGGCCGTTAT TCGGCAACCC GACGGCCCTC GACAGCGCAC TGGAAAATAT CGTTCGCAAC
GCACTGCGTT ATTCCTACAG TCGCATCACC GTCTCTTTCT CCATCGACAA TCAGGGGGTA
ACTATTGTCG TCGGCGACGA CGGCCCCGGT GTCAGCCCGG AAGATCGGGA GCAGATTTTC
CGCCCGTTTT TCCGTACCGA CGAAGCGCGC GACCGCGAAT CCGGCGGTAC CGGCCTGGGG
TTGGCGATTG TCGAAACGGC CATCACCCAA CACCGCGGCT GGATCAAAGC GGACGATAGC
CCGCTGGGCG GATTGCAGCT CACACTATGG CTGCCGCTGT ACCAGCATTG A
|
|---|
| Protein sequence | MINSLTARIF AIFWLTLALV LVLVLLLPKL DSRQLTPLLE SEQRQGLMLE QHIEMELATD
PANDLLWWRR LFRVIDKWAP PGQRLLLVTS EGRVIGAQRQ EMQIVRNFIG QSDNADFPQK
KNYGRVELLG PFAIRDGEDN YMMYMIRPAN SPQSDFINLL FDRPLLLLLV TMLTSSPLLL
WLAWSLAKPA RKLKNAADDV ARGNLRQHPE LESGPQEFRA TGSSFNQMVS ALERMVTAQQ
RLLSDISHEL RTPLTRLQLA TALLRRRQGE NNELNRIETE TQRLDSMIND LLVLSRNQHK
NELSREVLKA DELWSDVLAD AGFEAEQMGK TLEVLAPPGP WPLFGNPTAL DSALENIVRN
ALRYSYSRIT VSFSIDNQGV TIVVGDDGPG VSPEDREQIF RPFFRTDEAR DRESGGTGLG
LAIVETAITQ HRGWIKADDS PLGGLQLTLW LPLYQH
|
|---|
| |