Gene Dd703_3800 details

Gene Information

• Locus tag: Dd703_3800
• ID: 8087185
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya dadantii Ech703
• Kingdom: Bacteria
• Replicon accession: NC_012880
• Strand: +
• Start bp: 4415661
• End bp: 4416146
• Gene Length: 486 bp
• Protein Length: 161 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 644837891
• Product: ribonuclease activity regulator protein RraA
• Protein accession: YP_002989375
• Protein GI: 242241194
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0684] Demethylmenaquinone methyltransferase
• TIGRFAM ID: [TIGR01935] RraA famliy; [TIGR02998] regulator of ribonuclease activity A

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATACG ATACTTCCGA ACTGTGTGAT ATCTATCATG AAGAGGTGAA TGTAGTTGAA 
CCTCTTTTCT CCAATTTTGG CGGACGTAGC TCATTCGGTG GAAAAATCAC CACGGTAAAA 
TGCTTTGAGG ATAACGGCCT GTTGTTCAAT GTGCTGGAAG AGAATGGCTG GGGGAAGGTG 
CTGCTGGTAG ACGGCGGCGG TTCGGTTCGC AGAGCGTTGA TTGATGCCGA ACTGGCACGA 
CTGGCGACAC AGAACGAGTG GGAAGGCATT GTGATATACG GTGCTGTGCG TCAGGTTGAC 
GACCTGGCCG AACTGGATAT CGGCATTCAG GCCATGGCAG CAACGCCTGC TGGTGCAGCC 
AGTGAAGGGA CGGGTGATAC CGATGTTCGA GTCAACTTCG GTGGAGTCAC TTTTTTCTCC 
GGCGACCATC TGTATGCCGA CAGCACCGGC ATCATCCTTT CTGAAGATCC GCTGGATCTG 
GAATAA 

 

Protein sequence

MKYDTSELCD IYHEEVNVVE PLFSNFGGRS SFGGKITTVK CFEDNGLLFN VLEENGWGKV 
LLVDGGGSVR RALIDAELAR LATQNEWEGI VIYGAVRQVD DLAELDIGIQ AMAATPAGAA 
SEGTGDTDVR VNFGGVTFFS GDHLYADSTG IILSEDPLDL E