Gene Dd703_3798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3798 
Symbol 
ID8087183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4413178 
End bp4414509 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content55% 
IMG OID644837889 
Productheat shock protein HslVU, ATPase subunit HslU 
Protein accessionYP_002989373 
Protein GI242241192 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit 
TIGRFAM ID[TIGR00390] ATP-dependent protease HslVU, ATPase subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAAA TGACCCCGCG CGAAATAGTC AGCGAGCTGG ATAGCCACAT CATCGGACAG 
GACAAGGCGA AACGCGCCGT GGCCATCGCG CTGCGCAACC GCTGGCGCCG TATGCAGTTG
GAAGAAGATC TGCGTCACGA AGTCACACCG AAAAACATCC TGATGATTGG GCCGACCGGC
GTGGGTAAAA CAGAAATCGC CCGTCGTTTG GCCAAACTGG CCAATGCGCC CTTCATCAAG
GTTGAAGCCA CCAAGTTCAC CGAAGTCGGC TATGTCGGCA AAGAAGTCGA CTCCATCATC
CGCGATCTGG CCGATGCCGC CATTAAAATG GTGCGTCAGT TGGCGGTAGA GAAAAACCGC
TACCGCGCCG AAGAACTGGC GGAAGAACGC ATTCTGGATG TCCTGGTGCC GCCGGCCAAA
AACAACTGGG GGCAAACGGA AGAAAGTAAC GAGCCCTCCC CGGCTCGCCA GGCTTTCCGC
AAAAAACTGC GCGAAGGTCA GCTGGATGAC AAAGAAATTG AAATCGAACT GGCGGCCGCG
CCGGTCGGCG TAGAAATCAT GGCGCCGCCG GGAATGGAAG AGATGACCAA CCAGTTGCAG
TCCATGTTTC AAAACCTGGC CGGACAGAAG CAAAAATCCC GCAAAATCAA AATCAAGGAT
GCGTTCAAAC AACTGGTGGA AGAAGAAGCC GGCAAGTTGG TCAATCCGGA AGAGCTGAAG
CAGCAGGCGA TTGATGCGGT AGAACAGCAC GGCATCGTGT TTATCGACGA GATCGATAAA
ATCTGCAAAC GCGGTGAAAC CTCCGGCCCG GATGTCTCCC GCGAAGGGGT TCAACGCGAT
CTGCTGCCGT TGGTTGAAGG CTGCACCGTT TCTACCAAGC ACGGCATGGT GAAAACCGAC
CACATCCTGT TTATCGCATC CGGCGCATTC CAGGTCGCCA GCCCGTCGGA TCTGATCCCC
GAATTGCAGG GCCGTTTGCC GATTCGTGTG GAACTGCAGG CGCTAACCAC AGAAGACTTC
GAACGTATTC TGACGGAACC AAGTGCAGCG CTGACCGAGC AATACAAGGC GCTGATGGCG
ACCGAAGGCG TAAACATCGA GTTCGCGCAG GATGGCATCC GTCGAATTGC CGAGGCGGCG
TGGCAAGTCA ACGAACGCAC GGAAAATATC GGCGCGCGCC GTCTGCACAC GGTGCTGGAG
CGTCTGATCG AAGACATCTC CTACAACGCC AGCGAAATGG GTGGTCAAAC CGTGACGATT
GATGCAGATT ACGTACGTAG TCACCTTGAC GAGCTGGTAG CAGATGAAGA TCTGAGCCGA
TTTATCTTAT AA
 
Protein sequence
MSEMTPREIV SELDSHIIGQ DKAKRAVAIA LRNRWRRMQL EEDLRHEVTP KNILMIGPTG 
VGKTEIARRL AKLANAPFIK VEATKFTEVG YVGKEVDSII RDLADAAIKM VRQLAVEKNR
YRAEELAEER ILDVLVPPAK NNWGQTEESN EPSPARQAFR KKLREGQLDD KEIEIELAAA
PVGVEIMAPP GMEEMTNQLQ SMFQNLAGQK QKSRKIKIKD AFKQLVEEEA GKLVNPEELK
QQAIDAVEQH GIVFIDEIDK ICKRGETSGP DVSREGVQRD LLPLVEGCTV STKHGMVKTD
HILFIASGAF QVASPSDLIP ELQGRLPIRV ELQALTTEDF ERILTEPSAA LTEQYKALMA
TEGVNIEFAQ DGIRRIAEAA WQVNERTENI GARRLHTVLE RLIEDISYNA SEMGGQTVTI
DADYVRSHLD ELVADEDLSR FIL