Gene Dd703_3779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3779 
Symbol 
ID8087157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4385049 
End bp4385876 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content46% 
IMG OID644837864 
Producttranscriptional regulator HdfR 
Protein accessionYP_002989355 
Protein GI242241174 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATACCG ACTTACTGAA AACCTTTCTG GAAGTCAGCA AGACCCGGCA CTTCGGGCGA 
GCGGCTGAAT CACTCTATCT GACACAGTCG GCTGTCAGTT TCCGTATCCG GCAACTGGAG
AATCAATTAG GGGCTAATCT GTTTACACGG CACCGTAATA ATATTCAATT GACGCCAGCA
GGAGAGCGCC TGTTACCTTA CGCTGAGAGC CTCATTGATA CTTGGCAAAT AGCCAAGAGG
GAAGTTGCTC GTTCCCAACA ACATAGTCAG CTTTCAATCG GTGCTACTGC ATCATTATGG
GAAGCATTTC TTACCAGCTG GCTGAACGCT CTCTATCAGC AGCGTCCTCT CCTCCAATTG
GAGGCCAGAA TCGCATTACG GCAGACTCTC GTAAAACAAT TACACGAGAG ACAGCTCGAC
CTTCTGATCA CGACAGAACC ACCCAAAATG GATGAATTAG GCAGCCAACT ATTGGGGTCT
TTTTCATTAT CATTATTTAC TACCAGACAT AATGAGAAAA TAGAAAATGC ACCTTACATA
AAACTCGAAT GGGGCGCGGA TTTCCATCAA CAGGAAAGCC GGTGGTTATC CGGCGGACAA
ACCTCAATCC TGACCACAAC ATCAGCGCAA TTAGCCCGAC AATTATTAGC CACAATAGGA
GGATGTGCAT TTTTGCCTAG CCATTGGGAG CAAAAATATT CTGACCTCAA GCCTTTAGAG
GATTTTGAAT TACTGGAAAG GCCATTTTAT GCCGTATGGC TTGAAAATGG GGATCAGCAA
GAGCTCATCT GCCAACTCTT AAAAACACCA ATACACGTAA CGGATTAA
 
Protein sequence
MDTDLLKTFL EVSKTRHFGR AAESLYLTQS AVSFRIRQLE NQLGANLFTR HRNNIQLTPA 
GERLLPYAES LIDTWQIAKR EVARSQQHSQ LSIGATASLW EAFLTSWLNA LYQQRPLLQL
EARIALRQTL VKQLHERQLD LLITTEPPKM DELGSQLLGS FSLSLFTTRH NEKIENAPYI
KLEWGADFHQ QESRWLSGGQ TSILTTTSAQ LARQLLATIG GCAFLPSHWE QKYSDLKPLE
DFELLERPFY AVWLENGDQQ ELICQLLKTP IHVTD