Gene Dd703_3754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3754 
Symbol 
ID8087132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4354945 
End bp4356441 
Gene Length1497 bp 
Protein Length498 aa 
Translation table11 
GC content57% 
IMG OID644837839 
ProductUbiD family decarboxylase 
Protein accessionYP_002989330 
Protein GI242241149 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases 
TIGRFAM ID[TIGR00148] UbiD family decarboxylases 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAGCA TGAAATACCG AGATTTACGT GAGTTCCTCG CGCAGCTTGA AGCCAGAGGC 
GAATTGAAAC GTATTCGCCA GCCGATCGAT CCCTATCTGG AAATGACCGA AATCGCCGAT
CGCACGCTGC GAGCCGAAGG GCCGGCGCTC TTGTTTGAAA ACCCGAAAGG GTATGACATC
CCGGTGCTGT GCAACCTGTT TGGTACGCCG AAGCGTGTTG CACTGGGGAT GGGGCAGGAG
GAAGTGAGTG CGTTGCGGGA TGTCGGTCGT CTACTGGCCT TTCTCAAGGA GCCCGAGCCG
CCGCGCGGAT TTCGTGATCT GGTTGATAAA TTGCCGCAGT TTCGGCAGGT ATTGAATATG
CCGACTAAGC GATTATCGTC GGCGCCCTGT CAGGAACGGG TCTTACAGGG TGATGAGGTC
GATCTGGGGA AGATCCCGGT GATGCATTGT TGGCCGCAAG ATGTCGCGCC GCTGGTGACA
TGGGGGCTGA CGGTTACACG CGGCCCGTTC AAAGAGCGCC AGAATCTGGG GATTTACCGC
CAGCAGGTGA TTGGCCGTAA TAAGCTCATC ATGCGTTGGC TGTCCCATCG TGGCGGCGCG
TTGGATTTTC AGGAGTGGTG TCAGCAACAC CCCGGAGAGC GTTTCCCGGT GGCGGTGGCG
CTGGGTGCTG ATCCGGCGAC TATCCTTGGC GCCGTAACGC CGGTGCCGGA TACATTGTCC
GAATATGCGT TTGCCGGGTT GCTGCGCGGC CATAAGACCG AAGTGGTTAA ATGCCTGACC
AGCGATCTGG ACGTGCCCGC CAGCGCAGAA ATCGTACTGG AAGGGTATAT CGACCCCGGC
GAAACGGCGC CCGAAGGGCC GTATGGCGAT CATACCGGTT ATTACAACGA AGTGGATGAT
TTCCCGGTCT TTACCGTTAC CCACATTACC CGGCGTCGGG ACGCTATCTA TCATTCCACC
TACACCGGCC GCCCACCAGA TGAGCCGGCG GTGTTGGGGG TGGCGTTGAA TGAAGTGTTT
GTTCCGCTGC TGCAAAAACA GTTCCCTGAG ATCGTCGATT TCTACTTGCC GCCGGAAGGC
TGTTCCTACC GGCTGGCGGT GGTGACGATG AAGAAACAGT ATGCAGGGCA CGCCAAACGA
GTCATGATGG GCGTCTGGTC TTTCCTGCGC CAGTTCATGT ACACCAAGTT TGTCATTGTT
TGTGACGATG ACATTAACGC CCGGGACTGG AAGGATGTTA TCTGGGCGAT GACGACTCGT
ATGGATCCCG CCCGCGATAC AGTGTTGATG GAAAATACGC CAATTGATTA TCTGGATTTT
GCGTCTCCGG TTTCCGGGCT GGGCTCCAAA ATGGGGCTGG ATGCGACCAA TAAATGGCCA
GGCGAAACGC AGCGCGAGTG GGGGCGTCCC ATTACCAGGG ATCCATCAGT CTGCGCTCGT
GTTGATGCTA TCTGGGATGA GTTAGCCATT TTCAGTGACA GCGGCAAACG GCGTTAG
 
Protein sequence
MISMKYRDLR EFLAQLEARG ELKRIRQPID PYLEMTEIAD RTLRAEGPAL LFENPKGYDI 
PVLCNLFGTP KRVALGMGQE EVSALRDVGR LLAFLKEPEP PRGFRDLVDK LPQFRQVLNM
PTKRLSSAPC QERVLQGDEV DLGKIPVMHC WPQDVAPLVT WGLTVTRGPF KERQNLGIYR
QQVIGRNKLI MRWLSHRGGA LDFQEWCQQH PGERFPVAVA LGADPATILG AVTPVPDTLS
EYAFAGLLRG HKTEVVKCLT SDLDVPASAE IVLEGYIDPG ETAPEGPYGD HTGYYNEVDD
FPVFTVTHIT RRRDAIYHST YTGRPPDEPA VLGVALNEVF VPLLQKQFPE IVDFYLPPEG
CSYRLAVVTM KKQYAGHAKR VMMGVWSFLR QFMYTKFVIV CDDDINARDW KDVIWAMTTR
MDPARDTVLM ENTPIDYLDF ASPVSGLGSK MGLDATNKWP GETQREWGRP ITRDPSVCAR
VDAIWDELAI FSDSGKRR