| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3737 |
|---|
| Symbol | secE |
|---|
| ID | 8087107 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 4331397 |
|---|
| End bp | 4331780 |
|---|
| Gene Length | 384 bp |
|---|
| Protein Length | 127 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644837815 |
|---|
| Product | preprotein translocase subunit SecE |
|---|
| Protein accession | YP_002989314 |
|---|
| Protein GI | 242241133 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0690] Preprotein translocase subunit SecE |
|---|
| TIGRFAM ID | [TIGR00964] preprotein translocase, SecE subunit, bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.168661 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCGA ATACCGAAGC TCAAGGAAAC GGGCGTGGCC TTGAAACGCT TAAGTGGCTG
ATCGTTGCCG TTTTACTGAT AATTGCGATT GTTGGCAACT ACTATTACCG CGATTTTAGT
CTGCCGTTGC GTGCATTAGC CGTAGTGATT CTGATTGCCG CTGCCGGAGG CGTTGCTTTG
CTGACGAGTA AAGGCAAATC CACTGTTTTG TTTGCGCGCG AAGCCCGTAC AGAAGTACGT
AAAGTCATAT GGCCTACCCG TCAGGAAACT CTGCACACAA CACTGATTGT CGCAGCGGTC
ACTGCGGTGA TGTCGCTGAT TCTGTGGGGG CTGGATGGCA TTCTGGTCCG TCTTGTGTCC
TTTATTACTG GCCTGAGGTT CTAA
|
|---|
| Protein sequence | MSANTEAQGN GRGLETLKWL IVAVLLIIAI VGNYYYRDFS LPLRALAVVI LIAAAGGVAL
LTSKGKSTVL FAREARTEVR KVIWPTRQET LHTTLIVAAV TAVMSLILWG LDGILVRLVS
FITGLRF
|
|---|
| |