| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3730 |
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| Symbol | |
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| ID | 8087100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | - |
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| Start bp | 4319645 |
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| End bp | 4323868 |
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| Gene Length | 4224 bp |
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| Protein Length | 1407 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644837808 |
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| Product | DNA-directed RNA polymerase subunit beta' |
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| Protein accession | YP_002989307 |
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| Protein GI | 242241126 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.544518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAGACT TATTAAAGTT TCTGAAAGCG CAAACTAAAA CCGAAGAGTT TGATGCGATC
AAAATTGCTC TGGCTTCGCC AGACATGATC CGTTCCTGGT CTTTTGGTGA AGTTAAAAAG
CCGGAAACCA TCAACTACCG CACGTTCAAG CCGGAACGTG ACGGTCTGTT CTGCGCCCGT
ATCTTCGGGC CGGTAAAAGA CTATGAGTGC TTGTGCGGCA AGTACAAGCG CCTGAAACAC
CGCGGCGTCA TTTGTGAGAA GTGCGGTGTT GAAGTCACCC AGACCAAAGT GCGTCGTGAG
CGCATGGGCC ACATCGAACT GGCGTCGCCG ACTGCGCACA TCTGGTTTTT GAAATCGCTG
CCGTCCCGCA TCGGTCTGCT GCTGGATATG CCGCTGCGCG ATATCGAGCG CGTGCTGTAC
TTCGAATCCT ATGTGGTGGT CGAAGGCGGT ATGACCAACC TGGAACGTCG TCAGATCCTG
ACCGAAGAGC AGTATCTGGA TGCGCTGGAA GAGTTCGGCG ATGAATTCGA CGCCAAGATG
GGCGCCGAGG CTATCCAGGC TCTGCTGAAG AACATGGATC TGGAGCAGGA ATGCGAGCAG
CTGCGCGAAG AACTGAACGA AACCAGTTCT GAAACCAAAC GCAAAAAGCT GACCAAGCGC
ATCAAGCTGT TGGAAGCGTT CGTGCAGTCC GGCAACAAGC CGGAATGGAT GATCCTGACT
GTGCTGCCGG TGCTGCCGCC GGATCTGCGC CCGCTGGTGC CGCTGGACGG CGGTCGTTTC
GCGACTTCCG ATCTGAACGA TCTGTACCGT CGCGTGATCA ACCGTAACAA CCGTTTGAAA
CGTCTGCTGG ATCTGGCTGC GCCGGATATC ATCGTTCGTA ACGAAAAACG TATGCTGCAG
GAAGCGGTTG ACGCCTTGCT GGATAACGGT CGTCGCGGTC GTGCGATCAC TGGCTCCAAC
AAGCGTCCGC TGAAATCTTT GGCCGACATG ATCAAAGGTA AGCAGGGTCG CTTCCGTCAG
AACCTGCTGG GTAAGCGCGT GGACTACTCC GGTCGTTCCG TGATTACCGT TGGTCCGTAC
CTGCGTCTGC ATCAGTGCGG TCTGCCGAAG AAAATGGCGC TGGAACTGTT CAAACCGTTC
ATCTACGGCA AGCTGGAACT GCGTGGCCTC GCGACCACCA TCAAAGCCGC CAAGAAAATG
GTGGAACGCG AAGAAGCCGT GGTATGGGAC ATCCTGGATG AAGTCATCCG CGAACACCCG
GTACTGCTGA ACCGTGCGCC GACACTGCAC CGTCTGGGTA TTCAGGCGTT TGAACCGGTG
TTGATCGAAG GTAAAGCCAT TCAGTTGCAC CCGTTGGTGT GTGCGGCGTA TAACGCCGAC
TTCGACGGCG ACCAGATGGC CGTTCACGTA CCGCTGACGC TGGAAGCCCA GTTGGAAGCG
CGCGCGCTGA TGATGTCCAC CAACAACATT CTGTCCCCGG CGAACGGCGA ACCGATCATC
GTTCCGTCTC AGGACGTGGT GTTGGGTCTG TACTACATGA CTCGCGACAA GGTGAACGCT
AAAGGCGAAG GCATGGTGCT GACCGGGCCG AAAGAAGCGG AGCGTATTTA CCGCGCCGGC
CTGGCTGAAC TGCATGCGCG TGTGAAAGTT CGTATCACCG AATACGAAAA AGACCCGCAG
GGCGAATGGA AAGCGAAAAC CAGCCTGATC GATACCACTG TAGGCCGTTC CATTCTATGG
ATGATCGTAC CGAAGGGTTT GCCTTACACC ATCGTTAACC AGGCGTTGGG TAAGAAAGCG
ATCTCCAAGA TGCTGAACAC CTGTTATCGC GTGCTGGGTT TGAAACCGAC GGTTATTTTT
GCCGACCAGA TCATGTACAC CGGTTTTGCT TACGCGGCGC GTTCCGGTTC TTCCGTTGGT
ATCGACGATA TGGTGATCCC GGCGAAGAAA GTGGAAATCA TCAGTGAAGC CGAAGCCGAA
GTGGCCGAGA TTCAGGAACA GTTCCAGTCT GGTCTGGTAA CGGCGGGCGA GCGCTATAAC
AAAGTCATCG ATATTTGGGC TGCGGCGAAC GAGCGTGTGG CCAAAGCGAT GATGGAAAAC
CTTTCTACCG AAACGGTGAT CAACCGTAAC GGTGAAGAGG AGCGTCAGGT TTCCTTTAAC
AGCATCTTTA TGATGGCTGA CTCCGGTGCG CGTGGTTCTG CGGCTCAGAT TCGTCAGCTG
GCGGGGATGC GTGGTCTGAT GGCGAAGCCG GACGGCTCCA TCATCGAAAC GCCGATCACT
GCGAACTTCC GTGAAGGTCT GAACGTACTC CAGTACTTCA TCTCCACGCA CGGTGCGCGT
AAAGGTCTGG CGGATACCGC ACTGAAAACC GCGAACTCCG GTTATCTGAC CCGTCGTCTG
GTCGATGTGG CGCAGGATCT GGTCGTGACC GAAGACGATT GCGGTACGCA CGAAGGCATC
ATGATGACCC CGGTCATCGA AGGTGGCGAC GTGAAAGAGC CGCTGCGTGA GCGCGTACTG
GGCCGTGTGA CGGCGGAAGA CGTGCTGAAG CCGGGTACTG CCGACATTCT GGTTCCGCGC
AACACGCTGC TGAACGAGAA ATGGTGTGAC CTGCTGGAAG AAAACTCGGT CGACGCGGTG
AAAGTACGCT CCGTGGTAGG TTGTGAAACC GACTTCGGCG TGTGCGCCAA GTGCTACGGT
CGCGATCTGG CGCGTGGTCA CATCATCAAC AAAGGTGAGG CCATCGGCGT TATCGCGGCA
CAGTCCATCG GTGAACCGGG TACCCAGCTG ACCATGCGTA CCTTCCACAT CGGTGGTGCG
GCATCGCGTG CGGCAGCCGA GTCCAGCATT CAGGTGAAAA ACAAAGGTAG CCTGAAACTG
AACAACGCCA AATTCGTGAT GAACAACGCC GGTAAGCTGG TTATCACCTC GCGTAACACC
GAGCTGAAAC TGATCGACGA ATTCGGTCGT ACCAAAGAAA GCTACAAAGT GCCTTACGGT
GCGGTGATGG CGAAAGGCGA CGGCGATCAG GTCAGCGGCG GCGAAACCGT GGCGAACTGG
GATCCGCATA CCATGCCGGT GATTACCGAA GTGAGCGGTA ACATTCGCTT CACCGACATG
ATCGACGGCC AGACGATTAC CCGTCAGACC GACGAACTGA CCGGTCTGTC TTCTATCGTG
GTGCTGGATA GCGCCGAGCG TACCGGCGGT GGTAAAGAAT TGCGTCCGGC GCTGAAGATT
GTCGATGCCA ACGGCAACGA TGTACTGATT CCAGGCACCG ATATGCCGGC CCAGTATTTC
CTGCCGGGCA AAGCCATCGT TCAATTGGAA GACGGTACTC AGATCGGCGC GGGCGATACC
CTGGCGCGTA TTCCGCAGGA ATCCGGCGGT ACGAAAGATA TTACCGGTGG TCTGCCGCGC
GTTGCGGATC TGTTCGAAGC GCGTCGTCCG AAAGAGCCGG CGATCCTGGC TGAAATCAGC
GGCGTAGTGT CCTTCGGTAA AGAAACCAAA GGCAAACGCC GTCTGGTGAT TACGCCGATG
GATAATGGCG ACCCATACGA AGAGATGATT CCGAAATGGC GTCAGCTCAA CGTATTTGAA
GGCGAACGTG TAGAGCGCGG CGACGTGATC TCCGACGGCC CGGAATCTCC GCACGACATT
CTGCGCTTGC GTGGCGTTCA TGCGGTAACT CGTTACATCG TGAACGAAGT GCAGGAAGTT
TACCGGCTGC AGGGCGTTAA GATTAACGAT AAACACATTG AAGTTATCGT TCGTCAGATG
CTGCGTAAAG GCACCATCGT CAATTCGGGC AGCTCCGAGT TCCTGGAAGG CGAGCAGGTG
GAAGTTTCGC GCGTCAAGAT CGCCAACCGT CAGTTGGAAA CAGACGGCAA GATCCCGGCT
ACTTATGCGC GTGATCTGTT GGGTATCACC AAAGCATCTC TGGCGACGGA ATCCTTCATT
TCCGCGGCAT CGTTCCAGGA AACCACGCGC GTGCTGACTG AAGCTGCCGT GGCGGGTAAA
CGCGATGAAC TGCGCGGTTT GAAAGAGAAC GTCATTGTGG GTCGTCTGAT CCCGGCCGGT
ACGGGTTATG CCTACCATCA GGATCGTATG CGTCGCCGTC AGGCGAACGA ACCGCAGTCT
GCCCCGCAGG TGAGTGCTGA AGAAGCTTCT GCGAATCTGG CTGAACTGCT GAATGCGGGC
CTGGGCGGTA GCGACGACGA ATAA
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| Protein sequence | MKDLLKFLKA QTKTEEFDAI KIALASPDMI RSWSFGEVKK PETINYRTFK PERDGLFCAR
IFGPVKDYEC LCGKYKRLKH RGVICEKCGV EVTQTKVRRE RMGHIELASP TAHIWFLKSL
PSRIGLLLDM PLRDIERVLY FESYVVVEGG MTNLERRQIL TEEQYLDALE EFGDEFDAKM
GAEAIQALLK NMDLEQECEQ LREELNETSS ETKRKKLTKR IKLLEAFVQS GNKPEWMILT
VLPVLPPDLR PLVPLDGGRF ATSDLNDLYR RVINRNNRLK RLLDLAAPDI IVRNEKRMLQ
EAVDALLDNG RRGRAITGSN KRPLKSLADM IKGKQGRFRQ NLLGKRVDYS GRSVITVGPY
LRLHQCGLPK KMALELFKPF IYGKLELRGL ATTIKAAKKM VEREEAVVWD ILDEVIREHP
VLLNRAPTLH RLGIQAFEPV LIEGKAIQLH PLVCAAYNAD FDGDQMAVHV PLTLEAQLEA
RALMMSTNNI LSPANGEPII VPSQDVVLGL YYMTRDKVNA KGEGMVLTGP KEAERIYRAG
LAELHARVKV RITEYEKDPQ GEWKAKTSLI DTTVGRSILW MIVPKGLPYT IVNQALGKKA
ISKMLNTCYR VLGLKPTVIF ADQIMYTGFA YAARSGSSVG IDDMVIPAKK VEIISEAEAE
VAEIQEQFQS GLVTAGERYN KVIDIWAAAN ERVAKAMMEN LSTETVINRN GEEERQVSFN
SIFMMADSGA RGSAAQIRQL AGMRGLMAKP DGSIIETPIT ANFREGLNVL QYFISTHGAR
KGLADTALKT ANSGYLTRRL VDVAQDLVVT EDDCGTHEGI MMTPVIEGGD VKEPLRERVL
GRVTAEDVLK PGTADILVPR NTLLNEKWCD LLEENSVDAV KVRSVVGCET DFGVCAKCYG
RDLARGHIIN KGEAIGVIAA QSIGEPGTQL TMRTFHIGGA ASRAAAESSI QVKNKGSLKL
NNAKFVMNNA GKLVITSRNT ELKLIDEFGR TKESYKVPYG AVMAKGDGDQ VSGGETVANW
DPHTMPVITE VSGNIRFTDM IDGQTITRQT DELTGLSSIV VLDSAERTGG GKELRPALKI
VDANGNDVLI PGTDMPAQYF LPGKAIVQLE DGTQIGAGDT LARIPQESGG TKDITGGLPR
VADLFEARRP KEPAILAEIS GVVSFGKETK GKRRLVITPM DNGDPYEEMI PKWRQLNVFE
GERVERGDVI SDGPESPHDI LRLRGVHAVT RYIVNEVQEV YRLQGVKIND KHIEVIVRQM
LRKGTIVNSG SSEFLEGEQV EVSRVKIANR QLETDGKIPA TYARDLLGIT KASLATESFI
SAASFQETTR VLTEAAVAGK RDELRGLKEN VIVGRLIPAG TGYAYHQDRM RRRQANEPQS
APQVSAEEAS ANLAELLNAG LGGSDDE
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