| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3699 |
|---|
| Symbol | |
|---|
| ID | 8087065 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 4285214 |
|---|
| End bp | 4285879 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644837775 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_002989278 |
|---|
| Protein GI | 242241097 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCATCAT GGCTGCAACT CATGGCAGAC TCCTTCTGGA GTCTGCTGTC CGCCGGAATT
CAATTTACGG TTCCCCTCGC AATCCTCTCT TTCATTCTTG GTCTGGCGGT CGGCGTCATC
GTCGCGTTGC TGCGTCTGTA TGGCCCGAAA CCCTTAAAAT GGTTCTGCGA TTTTTACGTG
TGGGTGATCC GCGGCACGCC GCTGCTCGTC CAGCTGTTTC TGATTTTTTA CGGTTTGCCC
AACGCGGGGA TTACGTTGGA TGCCTTTCCG GCAGCACTGA TTGGGTTCAC CCTCAATGTC
GGTGCCTATA CTTCGGAAAT TGTTCGCGGA GCGATCTTGT CAGTCCCTAA AGGACAATGG
AACGCAGCGT ATTCGCTGGG CATGAACGGC GCACAGGCGA TTCGCTGGGT GATCGTGCCG
CAATCGGTTT TCGTTTCCCT GCCGCCGCTC TCCAATACCT TTATTTCGCT GATCAAAGAT
ACATCATTGG CGGCAGTCAT TACCGTACCC GAAATGTTTC TGGCGGCGCA GCGCATTGTC
TCCGTCACCT ATGAACCGCT GATTCTCTAT GTTGAAGCGG CCCTGATTTA CCTGTTGTTC
AGTACGTTTC TCGGCAAGAT TCAGGTTCGG CTGGAAAAAT ATTACCAGCG GCACACCGTG
CATTGA
|
|---|
| Protein sequence | MPSWLQLMAD SFWSLLSAGI QFTVPLAILS FILGLAVGVI VALLRLYGPK PLKWFCDFYV
WVIRGTPLLV QLFLIFYGLP NAGITLDAFP AALIGFTLNV GAYTSEIVRG AILSVPKGQW
NAAYSLGMNG AQAIRWVIVP QSVFVSLPPL SNTFISLIKD TSLAAVITVP EMFLAAQRIV
SVTYEPLILY VEAALIYLLF STFLGKIQVR LEKYYQRHTV H
|
|---|
| |