| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3696 |
|---|
| Symbol | |
|---|
| ID | 8087062 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 4282112 |
|---|
| End bp | 4283089 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644837772 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_002989275 |
|---|
| Protein GI | 242241094 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.643345 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAA TTAATATCGA GACGATGGAT CTGAACCTCT TCAAGGTATT TGAAGCTTTG
TATGAAGAGG GCGGCGCTGG TCGTGCGGCA TTACGGCTGG GCGTCACCCA GTCGGCGATC
AGCGCTGCGC TGGGGCGTAT GAGGAATATC TACGGCGATC GTCTGTTTGA GCGCACAGGG
CGGGGGTTAC GTCCGACGCG GCGCGCAGAT GAACTCCATC CCATCATCAG CGATGCGCTC
AACAAGTGTC GCCAGAGCTT GTCGATGGCG AATTCGGTGG GGGATGAATT TCAGGGGCGC
ACGGTGACGA TGGGATGGTC CGACGATTAT GAGATTGCGC TGGCCAGGAC GCTGACCAAT
CAGGTCGCTG CGGAATATCC CGGTATTCGG CTGATCTTCC GGCAGACCCA CAGCCGAGTA
GCTGCGGATA TGCTGATGGA GCGAGCGGTG GATCTGGCTA TTTCCACGGA GGGGTTTTCG
TCAAGTATTC TGGGTCGGCA AGTGCTGGGC GGCGGGAGTT ATGCCTGCCT GCTGGACAAC
CGGCCAGATG CGCCGGATGC GCTGACGTTG GAAGAGTACA TCCGTCGTCG ACATATTTTG
GTTTCATCGG GCGGATTTAT CGGCATCGTG GATGAAGCGC TGGCGGCACT CGGGTTGCAG
CGTCGGATTG AAGTATCCAC TACCCATTTT GCAGCCGTTC CTTATCTGCT TAAGGGGTCA
GAATCGCTGG TGACGCTGCC GGCCCATGCC GCCTACCCGA TTGCGGCAAT CGCCGATCTG
CGCGTGCTGC CTTGTCCGCT GGTTTTGCCT GGTTACGCCA TTGAACTGGG GTGGCGGCTC
GACGCATTAC GCGATCCGGC GGTCGTCGCC GTCAGGCAAG CGGTTCAATG CGTGTTTGCC
GAACGGCGAT CTGACGACGA ATACGGCCTG ATCTCCGGAA GATTGAACAA AAAAGAGCCG
CCCGATGGCC GTTCTTAG
|
|---|
| Protein sequence | MNKINIETMD LNLFKVFEAL YEEGGAGRAA LRLGVTQSAI SAALGRMRNI YGDRLFERTG
RGLRPTRRAD ELHPIISDAL NKCRQSLSMA NSVGDEFQGR TVTMGWSDDY EIALARTLTN
QVAAEYPGIR LIFRQTHSRV AADMLMERAV DLAISTEGFS SSILGRQVLG GGSYACLLDN
RPDAPDALTL EEYIRRRHIL VSSGGFIGIV DEALAALGLQ RRIEVSTTHF AAVPYLLKGS
ESLVTLPAHA AYPIAAIADL RVLPCPLVLP GYAIELGWRL DALRDPAVVA VRQAVQCVFA
ERRSDDEYGL ISGRLNKKEP PDGRS
|
|---|
| |